BIOCHEM 3 - Separation Techniques Flashcards

1
Q

Sources of Starting Material

A

a. Animal or plant tissues (ex. Myoglobin from beef muscle)

b. Microorganisms

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2
Q

Criteria for choosing a sample

A

ease of obtaining sufficient quantity of tissue
amount of biomolecule in the tissue
any properties peculiar to the biomolecule of choice

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3
Q

A procedure in which the pH of the protein mixture is adjusted to the pI of the protein to be isolated to selectively minimize its solubility.

A

Isoelectric precipitation

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4
Q

– liberation of biomolecule to the cell

-process of breaking cells open to release organelles and obtain a pure sample

A

Homogenization

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5
Q

types of Mechanical Disruption

A

a. French press –
b. Ultrasound/sonication –
c. Beadmill –
d. Use of high speed blender
e. Grinding with sand or alumina
f. Hand homogenizer

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6
Q

a type of mechanical disruption in which cells are forced through a small hole under very high pressure

A

french press

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7
Q

a type of mechanical disruption in which there’s the use of ultrasonic vibrations

A

Ultrasound/sonication

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8
Q

a type of mechanical disruption in which the cell wall is ripped from the cell when the material undergoes rapid vibration with glass beads

A

Beadmill

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9
Q

method of solubilization

– involves suspension of cells in a hypotonic solution

  • a hypotonic solution contains a semi-permeable membrane
  • cells will swell and eventually burst
  • organelles will come out of the cell, thus isolating the protein
A
  1. Osmotic lysis (for animal cells)
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10
Q

methods of solubilization

A
mechanical disruption
Osmotic lysis (for animal cells)
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11
Q

principle of isoelectric ppt

At ____ protein will agglomerate and you can now precipitate the protein

A

zwitterion,

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12
Q

Solubility of a protein at low ionic strength generally increases with the salt concentration.

A

Salting in

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13
Q

ph at which a molecule carries no net charge

  • point at which the protein has reduced solubility
  • protein is unable to react with medium and so it will fall out of the solution
A

Isoelectric ph or point–

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14
Q

Decrease in solubility of proteins and other substances in aqueous solution at high ionic strength. It is a result of the competition between added salt ions and other dissolved solutes for molecular solvation.

A

Salting out

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15
Q

Process of subjecting a suspension of sample at greatly increased gravitational field (centrifugal force) by rapidly rotating a receptacle containing the sample which will lead to sedimentation of particles

A

centrifugation

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16
Q

for separation of crude mixtures of cellular components

A

Differential Centrifugation –

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17
Q

basis of Differential Centrifugation –

A

-basis: molecular size

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18
Q
  • A process that separates molecules by the use of semi-permeable membrane.
  • It is the movement of molecules by diffusion from high concentration to low concentration.
A

dialysis

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19
Q

• When macromolecular solution is forced under pressure thru a semi-permeable bag/disc

A

C. Ultrafiltration

20
Q

• Column is packed with porous beads.

A

D. Gel Filtration Chromatography

21
Q

• Small molecules enter the beads and are retarded, while, large molecules cannot enter and so they migrate faster.

A

D. Gel Filtration Chromatography

22
Q

• With special disk and funnel

A

C. Ultrafiltration

23
Q

• Separation of molecules in a mixture depends on the affinity to either mobile or stationary phase.

A

A. Chromatography

24
Q

• Types of chromatography based on the polarity of each phase:

A

normal phase

reverse phase

25
Q

Mobile phase- least polar

Stationary phase- polar

A

Normal Phase chromatography

26
Q

Mobile phase- polar

Stationary phase- least polar

A

Reverse Phase chromatography

27
Q

• A procedure based on the ability of proteins to interact with specific molecules

A

Affinity Chromatography

28
Q

• It is the separation of charged particles in an electric field thru a support medium.

A

A. Electrophoresis

29
Q
  • Involves electrophoresis of protein mixtures thru stable ph gradient medium.
  • Protein will migrate to the medium where ph = Iph
A
  1. Isoelectric focusing
30
Q

– rate of movement of particles is proportional to their net charge and inversely related to their size

A
  1. Gel electrophoresis
31
Q

types of Gel electrophoresis

A
  • Agarose Gel Electrophoresis (AGE)

* Polyacrylamide Gel Electrophoresis (PAGE)

32
Q
  • mask the intrinsic charge of protein due to large negative charge it imparts on it
  • a surfactant; breaks disulfide bridges
A

SDS

33
Q

In SDS PAGE, which proteins will migrate easily

A

those with low MW

34
Q

• Similar to affinity chromatography but it contains a resin

A

Ion exchanger

35
Q

Column is packed with resin that have ligand (either positive or negative in charge)

A

Ion exchanger

36
Q

type of chromatography wherein Interaction is based on net charge

A

Ion exchanger

37
Q

Resin of cation exchanger chrom

A

anion resin

38
Q

first elution of cation exchanger chrom

A

anion

39
Q

last elution of cation exchanger chrom

A

cation

40
Q

Resin of anion exchanger chrom

A

cation

41
Q

first elution of anion exchanger chrom

A

cation

42
Q

last elution of anion exchanger chrom

A

anion

43
Q

when ph < pI

A

AA is + charged

44
Q

when ph = pI

A

AA is zwitterion

45
Q

when ph > pI

A

AA is - charged