Inro To Virology Flashcards
A virus is an infectious agent that is minimally constructed of two components:
1) a ____
2) a ____
genome
capsid
a genome of a virus consists of either ribonucleic acid (RNA) or deoxyribonucleic acid (DNA), or both
T/F
F
Not both
a capsid is a ____-containing structure designed to _____
protein
protect the genome.
A complete virus particle combining these structural elements is called a ______.
virion
Terminology
-Virion: The ______
-Capsid: The —— that surrounds ___
-Nucleocapsid: The ____ plus the ____.
-Capsomeres: The _______
complete virus particle.
protein coat; nucleic acid.
nucleic acid; capsid
structural protein units that made up the capsid.
Terminology
Surface Proteins: These are _____ found on the ____ of viruses that facilitate ______ of the virion into host cells.
glycoproteins
lipid envelope
attachment and entry
Viral Envelope: This is the _____ of some types of viruses. Usually derived from portions of the _____ and includes some ______
outermost layer
host cell membranes
viral glycoproteins.
Characteristics of VIRUSES
Viruses range in size between __-__ nanometers ( nm ).
20-300
Viruses are (smaller or larger ?) than bacteria
Smaller
Viruses possess cellular organelles, such as mitochondria and ribosomes.
T/F
F
They lack it
Viruses are obligate cellular parasites , meaning that They _________
replicate only inside living cells.
Viruses replicate through replication of their ______ and synthesis of the ____
nucleic acid
viral protein.
Viruses do not multiply in chemically defined media.
T/F
T
Viruses undergo binary fission
T/F
F
They do not
CLASSIFICATIONS
Viruses are classified based on
-_____
-______
-______
type and structure of the viral nucleic acid (Genome)
-type of symmetry of the virus capsid (Capsid Symmetry)
-presence or absence of a lipid envelope. (Envelope)
Based on the genome
-____viruses or ___ viruses
-_____ or ____
-_____stranded or ____ stranded
DNA; RNA
Linear or Circular
Single; double
some viruses are also recognized as segmented.
T/F
T
DNA GENOME
*Linear genome: ______,______, and ____
*Circular genome: _____ and ____ and ______
adenoviruses, herpesviruses, and poxviruses
polyomaviruses and hepadnaviruses and papilloma virus
RNA GENOME
(1)Positive-sense (+) RNA
-Directly translated into protein
T/F
T
Positive-sense (+) RNA genome has (Same or different?) sequence as _____
Same
messenger RNA (mRNA)
Exception to the Positive-sense (+) RNA viruses is the _____ in which the (+) RNA genome is ____ but is converted into ___, which then acts as ______
retroviruses
not translated
DNA
a template for production of mRNA.
Negative-sense (-) RNA
The Sequence is (identical or complementary?) to mRNA
complementary
Negative-sense (-) RNA
Must be copied into mRNAs for protein synthesis
T/F
T
Double-stranded (+/–) RNA:
copying of (- or +?) strand generates mRNA for protein synthesis
(-)
Segmented GENOME
-Found in the __viruses, a dsRNA genome, and in three families of (-) ssRNA viruses (____viruses, __viruses, and ___viruses)
-Consists of several pieces, or segments, each of which encodes at least one polypeptide
reo
orthomyxo; arena; bunya
Segmented genome viruses
Can’t undergo reassortment among genomic segments
T/F
F
It may
Based ON CAPSID SYMMETRY
(1)____
(2)______
(3)_____
Based ON THE Envelope
____
_____
Cubic
Helical
Complex
Naked
Enveloped
Based ON CAPSID SYMMETRY
(1)Cubic
The virus particle is _____ in shape (almost ____ particle ) and the nucleic acid contained inside the capsid.
(2)Helical
The virus particle is _____ or ______ , and the nucleic acid is _____
(3)Complex
The virus particle does is ???
icosahedral
spherical
elongated or pleomorphic
spiral
not confirm either cubic or helical symmetry.
DNA VIRUSES
The _____ viruses( the acronym)
HHAPPPPy
DNA viruses!!!
Single stranded unenveloped = ____
Double stranded enveloped=________
Double stranded unenveloped = _________
parvo
Hepadna, herpes, pox
Adeno,papilloma, polyoma
Parvo- linear or circular
Hepadna- linear or circular
Herpes-linear or circular
Pox - linear or circular
Adeno- linear or circular
Papilloma -linear or circular
Polyoma- linear or circular
Linear
Circular
Linear
Linear
Linear
Circular
Circular
Largest DNA virus = ____
Smallest DNA virus = ____
pox
parvo
Only DNA virus that doesn’t replicate in the nucleus =___
POX
Based ON THE Envelope
Naked
Enveloped
Which is sensitive/resistant to heat,acid,detergent,dying?
Effect of drying?
Naked is resistant; enveloped is sensitive
Naked-retain infectivity ; enveloped-lose infectivity
How are enveloped and baked viruses Released from host cell??
And does the host cell survive
Naked- By cell lysis (host cell killed)
By budding(host cell survives)
Survival of naked and enveloped viruses within GIT
And state the exceptions
Naked- yes
Enveloped-no . Except Corona and Hepadna
Mode of spread of naked viruses
Mode of spread of enveloped viruses
Naked-Formites,dust,fecal-oral
Enveloped-Secretions, organ or blood transplants, large droplets
Components of naked viruses include
Phospholipids, proteins, glycoproteins
T/F
F
Only proteins
The rest are for enveloped viruses
Immune response to naked viruses??
Antibody response
Immune response to enveloped viruses??
Antibody and cell mediated responses that contributes to pathogenesis
all RNA viruses replicate in the cytoplasm except _____ and ____ virus
retrovirus and influenza
Reovirus
Naked or enveloped
Single or double stranded
Linear or circular
Capsid symmetry?
Examples
Naked
Double
Linear
Icosahedral
Coltivirus
Rotavirus
Picornaviruses
Naked or enveloped
Single or double stranded
Linear or circular
Capsid symmetry?
Examples
Naked
Single
Linear
Icosahedral
PERCH
polio,echo,rhino, coxsackie HAV
Hepevirus
Naked or enveloped
Single or double stranded
Linear or circular
Capsid symmetry?
Examples
Enveloped
Double
Linear
Icosahedral
HSV
Calicivirus
Naked or enveloped
Single or double stranded
Linear or circular
Capsid symmetry?
Examples
Naked
Single
Linear
Icosahedral
Norovirus
Flaviviruses
Naked or enveloped
Single or double stranded
Linear or circular
Capsid symmetry?
Enveloped
Single
Linear
Icosahedral
Togaviruses
Naked or enveloped
Single or double stranded
Linear or circular
Capsid symmetry?
Enveloped
Single
Linear
Icosahedral
Retrovirus
Naked or enveloped
Single or double stranded
Linear or circular
Capsid symmetry?
Examples
Enveloped
Single
Linear
Icosahedral and complex and conical
HTLV
HIV
HTLV- _____
HIV-____
T-cell leukemia
AIDS
Rhinovirus- _____
Coltivirus- _____
Common cold
Colorado tick fever
Rotavirus- cause of ____ in children
Fatal diarrhea
Coronavirus
Naked or enveloped
Single or double stranded
Linear or circular
Capsid symmetry?
Symptoms
Enveloped
Single
Linear
Helical
Common cold; SARS, MERS, COVID-19
Orthomyxoviruses
Naked or enveloped
Single or double stranded
Linear or circular
Capsid symmetry?
Symptoms
Enveloped
Single
Linear
Helical
Influenza virus
Paramyxoviruses
Naked or enveloped
Single or double stranded
Linear or circular
Capsid symmetry?
Examples
Enveloped
Single
Linear
Helical
Parainfluenza
RSV
Measles, mumps
Rhabdoviruses
Naked or enveloped
Single or double stranded
Linear or circular
Capsid symmetry?
Symptoms
Enveloped
Single
Linear
Helical
Rabies
Filoviruses
Naked or enveloped
Single or double stranded
Linear or circular
Capsid symmetry?
Symptoms
Enveloped
Single
Linear
Helical
Ebola, Marburg hemorrhagic fever
Arenaviruses
Naked or enveloped
Single or double stranded
Linear or circular
Capsid symmetry?
Symptoms
Enveloped
Single
Circular
Helical
LCMV
Lassa fever
Bunyavirus
Naked or enveloped
Single or double stranded
Linear or circular
Capsid symmetry?
Enveloped
Single
Circular
Helical
Reverse transcriptase
Aka
_______
RNA dependent DNA polymerase
Mention 1 dna virus with reverse transcriptase
Hepadnavirus
Hepadnavirus is a retrovirus
T/F
F
HerpesVirus is to Herpes
As
Pox virus is to ______ and _____
As
Hepadnavirus is to ________
As
Papilomavirus is to _____
As
Polyomavirus is to _____ and _____
As
Parvovirus is to ______
Smallpox ; cowpox
Hepatitis
HPV
JK; BK
B19 virus
JC = _______
BK= ______
Junky cerebrum
bad kidney
List the +RNA naked viruses
Calicivirus
Picornavirus
List of +RNA enveloped viruses
Coronavirus
Flavioviruses
Togaviruses
Example of a double cap side RNA virus
Reovirus
Example of a + RNA virus using DNA polymerase
Retrovirus
Example of 5 negative strand rna viruses
Bunya
Arena
Orthomyxo
Paramyxovirus
Rhabdo
Only double stranded rna virus
Reovirus
List the rna icosahedral viruses
Calici
Flavi
Toga
picorna
Reovirus
Retro
List the rna helical viruses
Corona
Bunya
Arena
Orthomyxo
Paramyxovirus
Rhabdo
List the circular rna viruses
Bunya
Arena
Examples of reoviruses
Rotavirus
Coltivirus
Examples of picornaviruses
P olio
E cho
R hino
C oxsackie
H AV
Example of Orthomyxo viruses
Influenza
Example of paramyxovirus
Parainfluenza
RSV
Measles, Mumps
Examples of filo, Rhabdo, and arena viruses
Ebola, rabies, Lassa fever
_________ introduced the term virus in microbiology.
Edward Jenner
Virus in Greek means ———.
poison
Defective virus: the virus cannot ______, it requires ______
replicate by its own
helper virus.
Nanometer : _____
milli-micron.
The icosahedron particle is composed of ___ equilateral triangles , ___ vertices and has ____ rotational symmetry.
20
12
2,3,5
Size of viral genome is in _____ or _____
Kilobases (kb)
Kilobase pair(Kbp)
It’s important to know the susceptibility of viruses to physical and chemical agents especially ____ and _____
Ether
Detergents
Global system of naming and identifying viruses is by _________
International committee on taxonomy of viruses (ICTV)
Use of suffix to identify the taxon
Order -
Family-
Subfamily-
Genus -
Species-
Virale
Viridae
Viriae
Virus
Virus
There are ___ DNA virus families recognized in humans
There are ___ RNA virus families recognized in humans
7
14
Classify Ebola!
Order-
Family-
Genus-
Species-
Mononegavirales
Filoviridae
Ebolavirus
Ebolavirus Zaire
Classify herpes!
Order-
Family-
Subfamily-
Genus-
Species-
Herpesvirales
Herpesviridae
alphaherpesvirinae
Simplexvirus
Herpes Simple X virus type 1
Size of their genomes!!
Hepadna
Herpes
Pox
3.2
125-240
130-375
Examples under herpesvirus
Varicella-zoster virus
Human cytomegalovirus
Simplex
Roseolovirus
Lymphocryptovirus
Examples under parvoviridae
Parvovirus
Erythrovirus
Dependovirus
Examples under pox viridae
Orthopox
Suispox
Avipox
Mollusci pox
Examples under Arenaviridae
Lassa , mopeia, junin, machupo
Examples under astroviridae
Astrovirus
Examples under bunyaviridae
Bunyavirus, Nairovirus, hantanvirus, phlebovirus
Examples under caliciviridae
Norwalk
Hepatitis E
Examples under coronaviradae
Coronavirus, SARS virus
Examples under filoviridae
Ebola, Marburg
Examples under flaviviridae
West Nile, dengue fever, yellow fever , hepatitis C
Insect that transmits West Nile, dengue fever, yellow fever?
Mosquitoes
Examples under picornaviridae
Enterovirus
Heptovirus
Rhinovirus
Genus of HIV Is??
Lentivirus
Examples under rhabdovirus
Rabies, lyssa, vessiculovirus
Examples under togaviridae
Alpha virus
Rubivirus
Enterovirus includes ____
Poliovirus
Tell me the families of
Hep A
Hep B
Hep C
Hep E
Picornaviridae
Hepadnaviridae
Flaviviridae
Caliciviridae
Delta virus requires the presence of _______ virus to replicate
Hepatitis B virus
Epstein-Barr virus belongs to which family
Herpes family
Size of genome of
Papillomavoridae
Adenoviridae
Polyomaviridae
8
26-45
5
Picornaviridae - small (_____nm),
–The RNA genome is ___-___ kb in size.
28–30
7.2–8.4
Orthomyxoviridae -___-___-nm
The genome ___-___kb in size.
80- to 120
10–13.6
In orthomyxoviridae, Particles are either ______ or _____, with surface projections that contain ______ or ______ activity.
round or filamentous
hemagglutinin or neuraminidase
Paramyxoviridae - RNA is ___-___kb in size.
16–20
Example of ambisense viruses
Reovirus
Arenavirus
Mention 2 ether resistant viruses
Picornaviridae
Flaviviridae
Acyclovir inhibits HIV replication
T/F
T