14.3 Studying the Human Genome Flashcards

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1
Q

How do scientists read the best sequences of DNA

A

By using tools that cut separate and replicate DNA base by Base

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2
Q

Restriction enzymes

A

Enzymes that cut DNA into restriction fragments 

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3
Q

Restriction enzymes are also known as

A

Restriction endonuclease

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4
Q

Restriction enzymes are made by

A

Bacteria whose job is to cut DNA into smaller pieces so they can be easily analyzed when is extracted from a cell

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5
Q

Do restriction enzymes cut DNA at the same places

A

No they are cut DNA a different sequences of nucleotides

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6
Q

Restriction fragments

A

Small precise pieces of DNA only several hundred base pairs long

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7
Q

Gel electrophoresis

A

A technique used by scientist to separate and analyzed differently sized restriction fragments

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8
Q

How many steps are there to gel electrophoresis

A

2

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9
Q

What are the steps of gel electrophoresis

A

1) A mixture of restriction fragments is placed into wells at one end of porous gel
2)  An electric voltage is applied to the gel in the negatively charged DNA moves towards the positive end of the gel

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10
Q

What is the gel in gel electrophoresis Usually made of

A

Agarose

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11
Q

The ___ the DNA the ___ it moves

A

Smaller faster

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12
Q

The wells in gel electrophoresis are located on the _____ Charged side of the gel

A

Negatively

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13
Q

There is a ____ on top of the gel in gel electrophoresis

A

Buffer which spreads electricity

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14
Q

What process do scientist use to read DNA

A

Sanger sequencing

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15
Q

Restriction site

A

Site where enzymes bond to split DNA

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16
Q

Restriction sites are usually how long

A

4 to 8 base pairs long

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17
Q

Sanger Sequencing

A

Sequencing DNA taken out of the ordered form made in gel electrophoresis

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18
Q

How many steps are in Sanger sequencing

A

3

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19
Q

What are the three steps of Sanger sequencing

A

1) Single strand of DNA fragments are put into a test tube with DNA polymerase of primer dideoxynucleotides and nucleotide bases
2) DNA polymerase makes complementary strands from the DNA strand and when I base with chemical die is attach the synthesis stops
3) Researchers usually separate the band with John electrophoresis in the sequences of the bases can be determined by the color of the dye

20
Q

dideoxynucleotides

A

Nucleotide bases with dye in them
Chain terminating nucleotides which stop sequences when they are bonded to the sequence

21
Q

Example of restriction enzyme

A

EcoRI

22
Q

EcoRI

A

Restriction enzyme that recognizes the restriction sequence GAATTC and cuts between the G and A bases which leaves AATT single stranded overhangs on both strands

23
Q

Sticky ends

A

The overhangs of AATT which can bond to a DNA strand that has complementary bases

24
Q

The human genome project

A

13 year international project that aimed to sequenced all 3 billion base pairs of human DNA and identifying all human genes

25
Q

When did the human genome project end

A

2003

26
Q

Where are copies of the human genome DNA sequence now available

A

Online

27
Q

What was the center of the human genome project

A

DNA sequencing

28
Q

How many steps are there to DNA sequencing

A

2

29
Q

What are the two steps of DNA sequencing

A

Breaking DNA Into manageable pieces and Shotgun sequencing

30
Q

How does a scientist break DNA

A

They identify the best sequences of certain portions of the DNA and uses regions as markers that scientist use to locate return to specific locations in the DNA

31
Q

Shot gun Sequencing

A

Matching DNA base Sequences together

32
Q

How many steps are there in shotgun sequencing

A

3

33
Q

What are the steps of shotgun sequencing

A

1) Cut DNA into different fragments and determine the base sequence
2) Computers find areas of overlap in the sequences and link them by overlapping the areas of overlap
3) Computers align the chromosomes relative to markers on the chromosome 

34
Q

What helps in understanding DNA and identifying genes and their DNA sequences

A

Promoters open reading frame sequences that separate entrance in axons and stop codons

35
Q

open reading frame

A

Sequence of DNA bases that will produce an mRNA sequence

36
Q

Where is open reading frame located

A

After Promoter

37
Q

SNP stands for

A

Single nucleotide polymorphisms

38
Q

SNPs

A

Single base differences which are Significant because the genomes of two different individuals are identical except for about one in every 1200 basis

39
Q

Haplotypes

A

Collections of linked SNPs That occur together

40
Q

Haplotypes are short for

A

Haploid genotypes

41
Q

International hapmap project

A

Project that began in 2002 whose goal is to locate and identify haplotypes in the human population that are linked to diseases and conditions to pave the way for life-saving medicinal care

42
Q

Bio informatics

A

Key research area in the human genome project
New field that combines molecular biology with informational science

43
Q

Genomics

A

The study of whole genomes including genes and their functions

44
Q

When the human genome project is completed in 2003 revealed

A

Fall reference sequence of DNA human genome haploid form containing 3 million nucleotide bases

45
Q

What sequences of diseases did the human genome project find

A

Sequences for diabetes and cancer

46
Q

Genetic information nondiscrimination act

A

Prohibits US insurance company is an employers from discriminating on the basis of information derived from genetic tests