Diagnostics - Stool Testing Flashcards

1
Q

What does a stool test provide?

A

A stool test provides a comprehensive snapshot of digestive function and GI microbiome. It is helpful for GI complaints and chronic systemic illnesses where poor GI function might be relevant, including metabolic endotoxaemia.

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2
Q

What is metabolic endotoxaemia?

A

Metabolic endotoxaemia is a persistent, low-grade inflammation caused by increased circulating endotoxins (LPS). It often happens with poor GI barrier integrity and can be a risk factor for chronic diseases like insulin resistance and autoimmunity.

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3
Q

What do stool tests evaluate?

A

Stool tests evaluate microbial markers (commensal bacteria, pathogens, parasites, pathobionts, mycology), and host markers (immune, digestive, inflammatory, intestinal permeability, occult blood).

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4
Q

What are the methodologies used in stool testing?

A

Methodologies include polymerase chain reaction (PCR), culture, and microbiology assessment.

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5
Q

How should stool test results be interpreted?

A

Stool test results should be analyzed considering patient symptoms, diet, and health history. The presence of a microbe or marker does not always indicate disease. Correlate results with symptoms and use lab reference guides for interpretation.

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6
Q

What dietary factors influence the microbiota?

A

Dietary models, like FODMAPs or high-fat diets, significantly alter the gut microbiota, affecting the presence of certain bacteria and health outcomes.

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7
Q

What does the marker calprotectin indicate?

A

Calprotectin is an inflammation marker. Levels >50 µg/g indicate inflammation, with NHS screening for IBD done at levels over 175 µg/g.

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8
Q

What does Eosinophil Protein X indicate?

A

Eosinophil Protein X is raised with intestinal inflammation, food allergies, parasites, and colitis. Normal is 1.1 mcg/g; moderate is 1.1–4.6 mcg/g; high is >4.6 mcg/g.

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9
Q

What does high beta-glucuronidase indicate?

A

High beta-glucuronidase, often elevated due to dysbiosis or a western diet, can impact estrogen excretion, leading to increased circulating estrogen.

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10
Q

What is pancreatic elastase used for in stool tests?

A

Pancreatic elastase measures digestive function. Normal is 200-500 µg/g; <200 µg/g indicates digestive support is needed, 100-200 µg/g indicates pancreatic insufficiency, and <100 µg/g indicates severe insufficiency.

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11
Q

What do high fecal fats indicate?

A

High fecal fats indicate fat maldigestion, often associated with pancreatic insufficiency, SIBO, or hypochlorhydria.

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12
Q

What does sIgA indicate in stool tests?

A

Secretory IgA (sIgA) measures immune defense in the GI mucosa. Low levels (<100 µg/g) indicate chronicity or susceptibility to GI infections, while high levels (>750 µg/g) suggest an upregulated immune response.

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13
Q

What does beta-defensin 2 indicate?

A

Beta-defensin 2 is an antimicrobial response marker. High levels (>62 ng/g) suggest immune response to microbial breach or GI inflammation, such as in ulcerative colitis.

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14
Q

What does zonulin indicate in stool tests?

A

Zonulin family peptides indicate intestinal permeability. High levels (>100 µg/g) suggest severe permeability issues like dysbiosis or coeliac disease.

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15
Q

What are short-chain fatty acids (SCFAs), and why are they important?

A

SCFAs are by-products of bacterial fermentation of fiber, primarily butyrate, propionate, and acetate. Butyrate fuels colon cells and modulates inflammation. Low SCFAs are linked to low-fiber diets or antibiotic use.

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16
Q

What is the role of Akkermansia muciniphila?

A

Akkermansia muciniphila degrades mucin and protects the mucosal barrier. Low levels increase the risk of metabolic endotoxaemia.

17
Q

What bacteria are associated with gas production?

A

Methanobrevibacter smithii (methane gas) and Desulfovibrio spp. (hydrogen sulfide) are associated with gas and bloating, often seen in SIBO cases.

18
Q

What are pathobionts?

A

Pathobionts are bacteria that become pathogenic under certain conditions, such as terrain changes. Examples include Prevotella copri and Klebsiella spp.

19
Q

What does stool testing for Helicobacter Pylori involve?

A

Stool testing for H. pylori involves fecal antigen or PCR testing, checking for higher-than-expected amounts or virulence factors. Results are correlated with symptoms and other markers like calprotectin.

20
Q

Which microbes are considered purely pathogenic?

A

Pure pathogens include Giardia, Clostridium difficile, Entamoeba histolytica, and Shigella. These microbes should not be present, and natural antimicrobials like oregano oil and garlic may be used for treatment.

21
Q

Are all parasites harmful?

A

Not all parasites are harmful. For example, Blastocystis hominis can cause IBS-like symptoms in some cases but is also found in healthy individuals.

22
Q

What is the significance of mucin-degrading bacteria in stool tests?

A

Mucin-degrading bacteria, such as Akkermansia muciniphila, protect the mucosal lining. Low levels are linked to poor gut barrier integrity and conditions like metabolic endotoxaemia.

23
Q

What should be considered when interpreting stool test results?

A

Stool test interpretation involves looking at microbial and host markers in the context of the patient’s history, diet, and symptoms to create a holistic understanding of gut health.