D1.1 HL only Flashcards
polymers
any of a class of natural or synthetic substances composed of very large molecules, called macromolecules, which are multiples of simpler chemical units called monomers
monomers
atoms or small molecules that bond together to form more complex structures such as polymers
nucleotides
basic building block of nucleic acids(RNA and DNA). A nucleotide consists of a sugar molecule (either ribose in RNA or deoxyribose in DNA)
phosphate group
a phosphorus atom bound to four oxygen atoms
Condensation reaction
any of a class of reactions in which two molecules combine, usually in the presence of a catalyst, with elimination of water or some other simple molecule
covalent bond
a chemical bond that involves the sharing of electrons to form electron pairs between atoms
phosphodiester bonds
a covalent linkage between the phosphate of one nucleotide and the hydroxyl (OH) group attached to the 3′ carbon of the deoxyribose sugar in an adjacent nucleotide, forming what is known as the “sugar-phosphate backbone” of DNA
anti-parallel
one strand runs in a 5’ to 3’ direction and the other runs in a 3’ to 5’ direction. This creates the twisting double helix structure of DNA.
replication fork
the area where the replication of DNA will actually take place. There are two strands of DNA that are exposed once the double helix is opened
helicase
enzymes that bind and may even remodel nucleic acid or nucleic acid protein complexes
Leading strand
The strand that runs in the 5’ to 3’ direction in the replication fork
Lagging strand
he strand of new DNA whose direction is opposite to the direction of the growing replication fork.
RNA primers
a short segment of single-stranded RNA used as a binding site for DNA polymerase to initiate DNA replication. DNA polymerase is only able to add nucleotides to an existing nucleotide chain
RNA primase
an enzyme that synthesizes short RNA sequences called primers
Okazaki fragment
short sections of DNA formed at the time of discontinuous synthesis of the lagging strand during replication of DNA
Topoisomerase
an essential enzyme that catalyzes the ATP-dependent negative super-coiling of double-stranded closed-circular DNA
Single-stranded binding proteins (SSBPs)
a protein found in Escherichia coli (E.coli) bacteria, that binds to single-stranded regions of deoxyribonucleic acid (DNA)
DNA polymerase III
an enzyme that synthesizes new DNA strandsby adding nucleotides to the 3’ end of a pre-existing or newly synthesized DNA
DNA polymerase I
an enzyme that removes RNA primers and replaces the RNA nucleotides with DNA nucleotides
DNA ligase
an enzyme that joins DNA strands through the formation of phosphodiester bonds in a process called DNA ligation
hydrogen bonds
an interaction in which a hydrogen atom bridges two electronegative atoms
base-pairing rules
A unit of two bases in a molecule of DNA or RNA. In DNA, adenine always pairs with thymine (A-T), and guanine always pairs with cytosine (G-C). RNA is the same, except that adenine always pairs withuracil(A-U)
complementary DNA strand
Stand of DNA produced from base-pairing with nucleotides in the template DNA strand
DNA template strand
The original strands of DNA act as a template for the synthesis of new strands of DNA