Biochemistry of Proteins Flashcards

1
Q

What do anticodons of tRNA molecules form base pairs with during translation

A

codons on mRNA

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2
Q

Why are amino acids degenerate

A

more than one codon can code for an amino acid

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3
Q

Why are codons unambiguous

A

1 codon can only code for 1 amino acid (or a stop)

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4
Q

What are the components needed for translation

A

Amino acids
aminoacyl-tRNA synthetases
protein factors
source of energy
RNA

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5
Q

What is the function of aminoacyl-tRNA syntheses

A

bind amino acids to their corresponding tRNA molecule
highly specific

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6
Q

What provides the energy for the covalent bond to form between the amino acid and the tRNA molecule

A

hydrolyses of ATP

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7
Q

What do the subunits of RNA consist of

A

small subunit for binding to ribosomes
large subunit that catalyses formation of peptide bonds

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8
Q

What are the 3 ribosomal binding points for tRNA

A

Exit
Peptidyl
Aminoacyl

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9
Q

Where does the energy come from needed for initiation of translation

A

hydrolysis of GTP

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10
Q

How does translation start

A

ribosomal subunit finds AUG (Start codon) on mRNA
Initiator tRNA with anticodon base pair with this

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11
Q

How does the ribosomal subunit move along the mRNA strand to find the start codon

A

ATP provides the energy

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12
Q

Where is the initiator tRNA located after anticodon pairs up

A

P siten (peptidyl)

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13
Q

What brings the next aminoacyl-tRNA after the start codon to the A site

A

An elongation factor

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14
Q

What happens after peptide bond is formed

A

peptide now located in A site
empty tRNA moves to E (exit) site

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15
Q

When does termination occur

A

when the A site of the ribosome encounters a stop codon

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16
Q

what happens after termination

A

finished protein is cleaved off tRNA

17
Q

what is a point mutation

A

change in a single base in DNA

18
Q

what does a missense mutation result in

A

change in amino acid sequence - change in protein function

19
Q

what is a nonsense mutation

A

creates a new termination codon which changes the length of the protein

20
Q

what is a silent mutation

A

no change to amino acid sequence
no effect on protein function

21
Q

why do silent mutations occur

A

degeneracy of the genetic code

22
Q

what is a frameshift mutation

A

addition or deletion of a single base (or 2 bases)

23
Q

What happens when the protein is finished being translated

A

targeting
modification
degradation

24
Q

what is targeting of a protein

A

protein is moved to final cellular destination
dependant on specific AA sequences

25
Q

Where do proteins go from free ribosomes

A

cytosol
nucleus
mitochondria

26
Q

where do proteins go synthesised in bound ribosomes

A

plasma membrane
endoplasmic reticulum
Golgi apparatus
secreted

27
Q

What are examples of post translational modifications

A

disulphide bonds
proteolytic cleavage
folding/assembling of subunits
phosphorylation