5.6 Steps of Translation Flashcards

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1
Q

What occurs during the first part of translation?

A

all parts are assembled at the ribosome

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2
Q

How does the ribosome look until translation is ready to be commenced?

A

two separate subunits

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3
Q

What is the first step of translation called?

A

initiation

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4
Q

What are the three parts of the ribosome?

A

aminoacyl site (A)
peptidyl site (P)
exit site (E)

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5
Q

What are the molecules needed at the initiation site at the ribosome?

A

mRNA stranded
charged tRNA
three protein initiation factors

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6
Q

What is the first step of initiation of translation?

A

binding of three protein initiation factors to the small ribosomal subunit which will then bind the mRNA strand

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7
Q

What is the modified amino acid that bacterial initiation codon encodes for?

A

fMet (n-formylmethionine)

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8
Q

What is the Shine-Delgarno Sequence?

A

short sequence of mRNA (AGGAGG) just upstream of the initiation AUG

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9
Q

What is the function of the Shine-Delgarno Sequence?

A

acts as a recruiter for the small ribosomal subunit and helps in recognition and binding to the initiation codon

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10
Q

Where does the first tRNA holding the complementary sequence to AUG bind?

A

peptidyl site on the ribosome

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11
Q

What happens once the first tRNA binds to the peptidyl site?

A

IF3 is released and the large subunit binds to the rest of the complex forming the 70s initiation complex

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12
Q

What happens once the 70s initiation complex is formed?

A

the other two IFs are released opening the aminoacyl site for subsequent amino acids

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13
Q

What is the second step of translation known as?

A

elongation

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14
Q

What escorts the next tRNA to the aminoacyl site?

A

elongation factor protein EF-tu

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15
Q

What does it mean for elongation factor to be GTP-ases?

A

they are linked to a molecule of GTP which will be hydrolyzed to GDP when the tRNA containing the amino acid is bound to the A site

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16
Q

What does hydrolyzing of the GTP bound to the elongation factor cause?

A

conformational change within the elongation factor to release the tRNA into the A site

17
Q

How are the amino acids sitting in the peptidyl and aminoacyl site bonded together?

A

the tRNA in the peptidly site will hydrolyze and break its high energy ester bond with the amino acid which will provide the energy for a peptide bond to form between the two amino acids

18
Q

Where does the tRNA from the peptidyl site move to once it releases its amino acid?

A

exit site E

19
Q

What is the process of translocation?

A

when the mRNA-tRNA+2 amino acid complex shifts towards the P site by a distance of three nucleotides

20
Q

What assists in the process of translocation?

A

a GTP-ase elongation factor EF-G