5.4 Regulation of Transcription Part 2 Flashcards

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1
Q

What is critical for efficient and correct transcription?

A

ability of promoters to be recognized by RNA polymerase

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2
Q

What are consensus sites?

A

points on DNA around the transcriptional start sites that are conserved

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3
Q

What are two examples of a consensus site?

A

Pribnow box
-35

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4
Q

Where is the Pribnow box found?

A

-10 (10 nucleotides upstream from the transcription initiation site

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5
Q

What are cis-acting elements?

A

sites located on the same strand near the region to be transcribed

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6
Q

What are the proteins that bind to cis-acting elements?

A

trans-acting factors

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7
Q

What are strong promoters?

A

promotors that elicit DNA binding every few seconds

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8
Q

What are weak promoters?

A

promoters that elicit DNA binding less

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9
Q

What do the other subunits of the RNA Polymerase do?

A

recognize different promoter sequences in different environmental conditions such as extreme temp and nutrient deficiency

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10
Q

How are new nucleotides linked to the growing chain?

A

phosphodiester bond

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11
Q

Which direction does RNA synthesis occur?

A

5’-3’

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12
Q

As transcription progress what happens?

A

sigma subunit dissociates and the core enzymes continues chain elongation

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13
Q

Can RNA polymerase perform proofreading?

A

yes

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14
Q

How long is the termination sequence to terminate RNA polymerase activity?

A

about 20 nucleotides long

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15
Q

What happens once the termination sequence is transcribed?

A

it forms back on itself to form a hairpin secondary structure

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16
Q

What is the hairpin secondary structure composed of?

A

GC rich regions following by a string of Us

17
Q

How is the RNA strand released from the DNA strand?

A

the string of Us on the hairpin secondary structure do not interact with DNA so the RNA can fall off

18
Q

What are the ways that transcription is different in eukaryotes?

A

eukaryotes
1. entire process occurs in the nucleus
2. more RNA polymerases
3. protein expression is regulated

19
Q

What is the function of RNA polymerases I and III?

A

transcription of transfer and ribosomal RNAs

20
Q

What is the function of RNA polymerase II?

A

responsible for protein-coding genes