Genetics Flashcards

1
Q

What constitutes the backbone of the DNA molecule?

A

deoxyribose and phosphate backbone

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2
Q

What type of bond joins bases?

A

hydrogen

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3
Q

What other name is the long arm of the chromosome called?

A

q arm

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4
Q

What is the short arm of the chromsome known as?

A

p arm

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5
Q

Waht is the function of the formation of chiasma bewteen homologous chromsomes during meisosis I?

A

genetic recombination

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6
Q

What is mosaicism?

A

2 or more populations of cells with different genetic constitutions within the same individual

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7
Q

What is germline mosaicism?

A

proportion of gametes in an individual have the same mutation

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8
Q

What is the usual cause of aneuploidy?

A

non-disjunction during meiosis

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9
Q

What happens in a Robertsonian translocation?

A

long arms of two acrocentric chromsomes join with loss of the short arms

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10
Q

What is found in the short arms of acrocentric chromosomes, and why does their loss in Robertsonian translocations not cause a clinical phenotype?

A

highly repetitive DNA sequences and ribosomal RAN genes

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11
Q

What is the translocation resulting in the philidelphia chromosome?

A

(9;22)

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12
Q

When is deletion of a segment of chromosome likely to visible microscopically?

A

greater than 5 megabases

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13
Q

Waht is needed for the use of FISH?

A

detects loss or gain of a specific small chromosomal region- need to know the region to be analysed

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14
Q

What is the function of microarray CGH?

A

allows analysis of the entire genome for small losses or gains

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15
Q

What does the HER2 gene encode?

A

epidermal growth factor receptors

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16
Q

What is a mendelian mutation?

A

mutation in a single gene

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17
Q

What is the likely cause if a patient has an AD disease that their parents don’t have?

A

germline mosaicism

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18
Q

Why may females who carry an x-linked recessive disorder display signs and sypmtoms of the disease?

A

random x-inactiviation

19
Q

Why would a female with an X-linked recessive disorder have a disease of the same severity as a male?

A

skewed X-inactivation e.g non-random inactivation or have Turner’s

20
Q

How are mitochondria inherited?

A

exclusively maternal

21
Q

What would be a mutation affecting all mitochondria in a cell?

A

homoplasmic

22
Q

what is the name for a mitochondrial mutation affecting a proportion of hte mitochondria in a cell?

A

heteroplasmic

23
Q

What are imprinted genes?

A

genes that are differentially expressed depending who whether they are maternally or paternally inherited

24
Q

What happens in Angelman’s syndrome?

A

child hasn’t inherited a functioning copy of the UBE3A gene on chromosome 15- needs to be maternally inherited to be active

25
Q

What would cause Angelman’s syndrome if there wasn’t a mutation in the UBE3A gene in the mother?

A

unusual transmission of genes- paternal uniparental disomy (inherited both chromosome 15 from father)

26
Q

What are the types of regulatory elements foudn upstream from genes?

A

enhancers and silencers

27
Q

What binds to the promotor in transcription?

A

transcription factor

28
Q

What are the differences between DNA and RNA?

A

RNA sugar phosphate backbone has ribose and uracil is substituted for thymine

29
Q

What is involed in splicing?

A

removal of intron

30
Q

Why do autosomal dominant loss of function mutations cause disease if one allele still works ?

A

haploinsufficiency or loss of function of second copy during somatic cell division

31
Q

What is haplosufficincy?

A

level of protein is important so loss of single copy reduces amount of protein produced sufficiently to cause a disease phenotype

32
Q

What is a dominant negative mutation?

A

mutation leads to creation of an abnormal protein that has an effect on the function of the normal version of the protein that is produced

33
Q

What is the function of immunohistochemsitry?

A

identifies protein expression in a cell

34
Q

Waht is a single nucleotide polymorphism ?

A

polymorphism involving a single change of base sequence

35
Q

What is a cop number variation?

A

polymorphism involving deletion or suplication of larger regions of hte genome

36
Q

What type of study is used to identify SNPs assocaited with disease?

A

association study

37
Q

Waht is mutation seen with ichthyosis vulgaris?

A

homozygous for mutation in the filaggrin gene

38
Q

What is the function of filaggrin?

A

during formation fo the cornified layer it is cleaved into multiple peptides that cause keratin filmanets to aggregate

39
Q

What is meant by codon usage shows redundancy?

A

the change in bases doesn’t change the amino acid

40
Q

Why does next generation sequencing have an advantgae over sanger sequencing?

A

allows sequencing of a larger number of genes

41
Q

Why is array comparative genomic hybridisation better than karyotyping as a first test for chromsome analysis?

A

higher resolution

42
Q

Can post-translational modification correct a wrong protein sequence?

A

No

43
Q

What is the difference in accuracy between sanger sequencing or NGS?

A

NGS is slightly less accurate than sanger sequencing

44
Q

What is the function of aCGH?

A

quantifies amount of DNA