XI Chap 9 Biomolecules Flashcards

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1
Q

An elemental analysis on plant tissue, animal tissue or microbial paste would result in what elements?

A

carbone, hydrogen, oxygen

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2
Q

The elemental analysis on a plant/animal tissue and a piece of earth’s crust would obtain similar elements. T or F?

A

True

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3
Q

Relative abundance of carbon, hydrogen and oxygen with respect to other elements is higher in ____________

living organisms or Earth’s crust?

A

living organisms

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4
Q

Describe how to conduct chemical analysis

A

take any living tissue
grind it in trichloroacetic acid –> thick slurry
strain using cheesecloth/cotton -> examine the filtrate for organic compounds

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5
Q

More technically accurate name for filtrate and retentate in chemical analysis of living tissue?

A

Filtrate: Acid-soluble pool
Retentate: acid-insoluble fraction

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6
Q

All the carbon compounds that we get from living tissues can be called ___________

A

biomolecules

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7
Q

Living organisms have both organic and inorganic elements and compounds in them. T or F?

A

True

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8
Q

How does one obtain the inorganic elements/compounds from living tissue?

A

Destructive experiment
Dry it, remaining material is dry weight. Burn tissue fully, all C compounds are oxidised to gaseous forms, remaining contains inorganic elements

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9
Q

What is ‘ash’

A

remains after drying and burning a tissue

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10
Q

Inorganic substances like sulphate and phosphate are also seen in the acid-soluble fraction. T or F?

A

True

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11
Q

Elemental analysis gives ____________ while analysis for compounds gives _________

A

elemental composition of living tissues (hydrogen, oxygen, etc.)

idea of organic and inorganic constituents

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12
Q

Amino acids are ______ compounds containing an amino group and a acidic group as ________ on the same ______

A

organic, substituents, carbon

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13
Q

Amino acids are on the alpha carbon, hence they are called ________

A

alpha amino acids

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14
Q

Amino acids are substituted _______

A

methanes

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15
Q

In amino acids, there are 4 _________ groups occupying ____ valency positions.

A

substituent, 4

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16
Q

What are the 4 substituent groups in amino acids?

A

Hydrogen
Carboxyl group
Amino group
Variable - R group

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17
Q

Based on the nature of _____ group there are many amino acids.

A

R

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18
Q

Only ______ (how many) types of amino acids occur in proteins

A

20

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19
Q

3 examples of R group in proteinaceous amino acids?

A

hydrogen H (glycine),
methyl group CH3 (alanine),
hydroxy methyl CH2-OH (serine)

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20
Q

Chemical and physical properties of amino acids are essentially of:

A

amino, carboxyl and R functional groups

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21
Q

Based on number of amino and carboxyl groups, there are _____ (what types of amino acids?)

A

acidic (glutamic)
basic (lysine, arginine)
neutral (valine)

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22
Q

What are some aromatic amino acids?

A

tyrosine,
phenylalanine,
tryptophan

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23
Q

Why is it that in solutions of different pH the structure of amino acids changes?

A

due to the ionizable nature of NH2 and COOH groups

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24
Q

% weight of the Hydrogen in Earth’s crust vs human body

A

0.14% (earth’s crust) vs 0.5% (human)

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25
Q

% weight of the Carbon in Earth’s crust vs human body

A

0.03% (earth’s crust) vs 18.5% (human)

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26
Q

% weight of the Oxygen in Earth’s crust vs human body

A

46.6% (earth’s crust) vs 65% (human)

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27
Q

% weight of the Nitrogen in Earth’s crust vs human body

A

very little (earth’s crust) vs 3.3 (human)

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28
Q

% weight of the Sulphur in Earth’s crust vs human body

A

0.03 (earth’s crust) vs 0.3 (human)

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29
Q

% weight of the Sodium in Earth’s crust vs human body

A

2.8 (earth’s crust) vs 0.2 (human)

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30
Q

% weight of the Calcium in Earth’s crust vs human body

A

3.6 (earth’s crust) vs 1.5 (human)

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31
Q

% weight of the Magnesium in Earth’s crust vs human body

A

2.1 (earth’s crust) vs 0.1 (human)

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32
Q

% weight of the Silicon in Earth’s crust vs human body

A

27.7 (earth’s crust) vs negligible (human)

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33
Q

What are “other” inorganic compounds found in living tissues (table 9.2)?

A

NaCl, CaCO3, PO4 3-, SO4 2-

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34
Q

Lipids are generally water insoluble or soluble?

A

Insoluble

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35
Q

A fatty acid has a _______ group attached to a _____ group

A

carboxyl group, R group

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36
Q

R group in simple fatty acid could be a _______ or _____ or ________

A

methyl (CH3) or ethyl (C2H5) or higher number of -CH2 groups (1 to 19 carbons)

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37
Q

Palmitic acid has _____ carbons including carboxyl carbon

A

16 carbons

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38
Q

Arachidonic acid has _____ carbons including carboxyl carbon

A

20 carbons

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39
Q

Fatty acids could be saturated or unsaturated. What do the bonds look like in each?

A

Saturated - without double bond

Unsaturated - with one or more C=C double bonds

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40
Q

Glycerol is a simple lipid. T or F?

A

True

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41
Q

Many lipids have both glycerol and fatty acids. T or F?

A

True

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42
Q

Glycerol is tri… ?

A

trihydroxy propane

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43
Q

In some lipids, fatty acids are found _______ with glycerol. What are the 3 types?

A

esterified,

mono, di and triglycerides

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44
Q

Mono-, di- and triglycerides are also called ____ and _____ based on melting points.

A

fats and oils

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45
Q

Fats have have a lower melting point than oils. T or F?

A

False

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46
Q

Some lipids have phosphorous and a _________ in them. They’re called phospholipids.

A

phosphorylated organic/nitrogenous compound

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47
Q

Phospholipids are found in _____ membrane.

A

cell

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48
Q

Lecithin is a __________

amino acid - phospholipid - carbohydrate - nucleoside

A

phospholipid

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49
Q

_________ tissues have lipids with more complex structures.

A

Neural

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50
Q

Nitrogen bases have ____ rings

A

heterocyclic

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51
Q

What are the nitrogen bases?

A

Adenine, Guanine, Thymine, Uracil and Cytosine

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52
Q

When nitrogen bases are attached to a sugar they are called ___________

A

nucleosides

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53
Q

When phosphate group is found esterified to sugar, in addition to nitrogen base, it is called _______

A

nucleotide

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54
Q

Name nucleosides and tides?

A

Nucleosides: Adenosine, guanosine, cytidine, thymidine, uridine

Nucleotides: Adenylic acid, guanylic acid, cytidylic acid, thymidylic acid, uridylic acid

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55
Q

DNA and RNA consist of nucleotides only. T or F?

A

True

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56
Q

If one were to make a list of biomolecules it would consist of 1000s of organic compounds. T or F?

A

True

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57
Q

Biomolecules are also known as ___________. Why?

A

metabolites

because all metabolic reactions result in transformation of biomolecules. they’re required for metabolic reactions and the results of these reactions.

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58
Q

In what tissues are all of these compounds present?

Alkaloids, flavonoids, rubber, essential oils, antibiotics, coloured pigments, scents, gums and spices

What are these compounds aka?

A

plant tissues;

secondary metabolites

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59
Q

In what tissues are all of these compounds present?

H, C, O, N, S, Na, Ca, Mg and Si

What are these compounds aka?

A

animal tissues;

primary metabolites

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60
Q

Primary vs. secondary metabolites?

A

Primary - animals, identifiable functions

secondary - plants, not all in-body functions are known but useful to human welfare & ecologically important

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61
Q

Carotenoids and anthocyanins are examples of?

A

pigments (secondary metabolites)

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62
Q

Morphine, Nicotine, trychnine, caffeine and Codeine are examples of?

A

alkaloids (secondary metabolites)

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63
Q

Monoterpenes, Diterpenes are examples of?

A

terpenoids (secondary metabolites)

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64
Q

Lemon grass oil is an example of?

A

essential oil (secondary metabolites)

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65
Q

Abrin and Ricin are examples of?

A

Toxins (secondary metabolites)

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66
Q

Concanavalin A is example of?

A

Lectin (secondary metabolites)

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67
Q

Vinblastin, curcumin are examples of?

A

drugs (secondary metabolites)

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68
Q

Rubber, gums, cellulose are examples of?

A

Polymeric substances (secondary metabolites)

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69
Q

What is one feature common to all compounds found in the acid-soluble pool?

A

molecular weights ranging from 18 to 800 daltons (Da)

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70
Q

Acid insoluble fraction has how many types of organic compounds? What are they?

A

4,

proteins, nucleic acids, polysaccharides and lipids

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71
Q

All acid soluble pool compounds weigh less than 800 Da whereas all acid insoluble pool compounds weigh in range of 10,000 Da and above (hence later called macromolecules). T or F?

A

False, first half is true, but not all acid insoluble pool compounds are heavy. Lipids do not exceed 800 Da.

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72
Q

Most molecules in the acid insoluble pool have molecular weights in the range of __________

A

10,000 Da and above

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73
Q

What are the 2 types of biomolecules (based on weight)

A

micromolecules - <1000 Da

macromolecules - >1000 Da (aka those found in acid insoluble fraction)

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74
Q

Biomacromolecules (and this excludes lipids) are polymeric substances. T or F?

A

True

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75
Q

Why do lipids come under acid insoluble fraction if they are so small?

A

cell membrane and other membranes are broken into pieces when tissue is ground. Forms vesicles that are not water soluble. Therefore they get separated along with acid insoluble pool.

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76
Q

Acid soluble pool roughly represents _______ composition

A

Cytoplasm

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77
Q

___________ and ___________ from the cytoplasm become the acid insoluble fraction

A

Macromolecules, organelles

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78
Q

__________ is the most abundant chemical in living organisms

A

Water

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79
Q

Proteins are polypeptides, ________ chains of amino acids linked by ____________

A

linear, peptide bonds

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80
Q

Each protein is a polymer of ___________

A

amino acids

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81
Q

A protein is a homo or heterpolymer?

A

Heteropolymer

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82
Q

What are essential amino acids? What is their source?

A

Cannot be made by our body. We get them from our diet/food.

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83
Q

Functions of proteins?

A
  • transport nutrients across cell membrane
  • fight infections
  • hormones
  • enzymes
  • receptors
  • structural proteins
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84
Q

_________ is the most abundant protein in animal world;

__________ is the most abundant protein in the biosphere

A

Collagen - animal

RuBisCo - biosphere

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85
Q

What is the function of collagen (protein)?

A

Intercellular ground substance

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86
Q

What is the function of trypsin (protein)?

A

enzyme

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87
Q

Acid insoluble pellet has carbohydrates. T or F?

A

True, polysaccharides

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88
Q

What is the function of insulin (protein)?

A

hormone

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89
Q

What is the function of antibody (protein)?

A

fights infectious agents

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90
Q

What is the function of receptor (protein)?

A

Sensory reception (smell, taste, hormone, etc.)

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91
Q

What is the function of GLUT-4 (protein)?

A

Enables glucose transport into cell

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92
Q

Polysaccharides are long chains of ________. They are threads containing different _______ as building blocks.

A

sugars; monosaccharides

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93
Q

Cellulose has how many types of monosaccharides?

A

1 - glucose

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94
Q

Cellulose is a homopolymer. T or F?

A

True, made of glucose only

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95
Q

_______ is a variant of cellulose, present as a store house of energy in plants whereas ______ variant is present in animals

A

starch, glycogen

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96
Q

______ is a polymer of fructose

A

Inulin

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97
Q

In glycogen (polysaccharide chain) , right end is called _________, left end is called _________

A

reducing, non-reducing

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98
Q

Polysaccharide chains have branches. T or F?

A

True

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99
Q

Starch forms _________ structures that can hold ______

A

helical secondary structures, can hold I2 molecules

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100
Q

Starch is ____ in color, while cellulose isn’t. What explains this?

A

blue.

Starch can hold I2, cellulose can’t (complex helixes absent)

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101
Q

Plant walls are made of ________

A

cellulose

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102
Q

Paper made from plant pulp and cotton fibre is __________

A

cellulosic

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103
Q

Complex polysaccharides found in nature have what as building blocks?

A

Amino-sugars and chemically modified sugars (glucosamine, N-acetyl galactosamine, etc.)

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104
Q

What are glucosamine and N-acetyl galactosamine?

A

amino-sugars / chemically modified sugars in complex polysaccharides

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105
Q

___________ of arthropods have complex polysaccharides called _____

A

Exoskeleton, chitin

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106
Q

Complex polysaccharides are mostly homopolymers (remember, the simple polysaccharide cellulose is a homopolymer). T or F?

A

True

107
Q

Nucleic acids are poly…..

A

polynucleotides

108
Q

Polysaccharides, polypeptides and polynucleotides comprise the ______ of any living tissue/cell

A

true macromolecular fraction

109
Q

Building block for nucleic acids is _________

A

nucleotide

110
Q

3 distinct compounds of nucleotide?

A
heterocyclic compound (nitrogen base)
monosaccharide (5-carbon sugar)
phosphoric acid / phosphate
111
Q

Sugar found in polynucleotides is either ribose (a _______ pentose) or ___-deoxyribose

A

monosaccharide, 2’

112
Q

In inorganic chemistry, structure referes to _______

A

molecular formulae

113
Q

Organic chemists always write a ________ view of molecules

A

2-D

114
Q

Physicists conjure up ________ views of molecular structures

A

3-D

115
Q

Biologists describe protein structure at how many levels? what are they?

A

4 levels:

  1. primary - sequence / positional info
  2. secondary - helix and other forms
  3. tertiary - hollow woolen ball
  4. quaternary - architecture of polypeptides / subunits wrt each other
116
Q

In primary structure, protein is imagined as a ______, leftmost of which is ____ and rightmost is ____

A

line, first amino acid, last amino acid

117
Q

First amino acid in primary structure is called _____, last is called _____

A

N-terminal

C-terminal

118
Q

Protein thread exists throughout as an extended rigid rod. T or F?

A

False

119
Q

Some portions of protein thread is folded in ___________ and some are folded into other forms

A

right handed helix

120
Q

Tertiary view gives us a ____-dimensional view of a protein

A

3-D

121
Q

_________ structure is absolute necessary for the many biological activities of proteins

A

Tertiary

122
Q

Some proteins are an assembly of more than one polypeptide or subunits. T or F?

A

True (quaternary structure)

123
Q

Linear string of spheres,
spheres arranged one upon each other in form of a cube or plate

^ what are these?

A

architecture of a protein (quarternary structure)

124
Q

What is the quarternary structure of adult human haemoglobin?

A

4 subunits, 2 identical to each other.

2 subunits of alpha, two of beta

125
Q

Peptide bonds of amino acids are formed when _____ group of one AA reacts with _____ group of the next AA with the elimination of ______. This process is called _____.

A

carboxyl (COOH) group
amino (NH2) group
water moeity
dehydration

126
Q

In a polysaccharide, monosaccharides are linked by a peptide bond. T or F?

A

False, glycosidic

127
Q

Peptides and glycosidic bonds are formed by _______ process

A

dehydration

128
Q

Glycosidic bond is formed between _______ atoms of two adjacent _______

A

2 carbon atoms, 2 adjacent monosaccharides

129
Q

In a nucleic acid, a _______ links the ______ of one sugar of one nucleotide to the _______ of the sugar of the succeeding nucleotide.

What is this bond called?

A

phosphate moeity, 3’C, 5’C

ester bond

130
Q

Why is it said that polypeptides have phosphodiester linkage?

A

2 ester bonds on either sides / chains => phosphodiester

131
Q

The Watson-Crick model (double helix) is one of many secondary structures exhibited by nucleic acids. T or F?

A

True

132
Q

The strand of DNA turns how many degrees in each step? in a full turn?

A

36, 360

133
Q

One full turn of a helical strand includes how many base pairs?

A

10

134
Q

Pitch of DNA is ____, rise per bp is _____

A

34 Å, 3.4 Å

135
Q

DNA that exhibits the Watson-Crick model features is called ___-DNA

A

B-DNA

136
Q

There are more than ______ forms of DNA named after English alphabets with unique structural features

A

a dozen

137
Q

Biomolecules are present in certain concentrations measured as ______ or _____

A

mols/cell of mols/litre

138
Q

One of the greatest discoveries ever made wrt biomolecules is ______

A

all biomolecules have a turn over => constantly being changed into other biomolecules and made from other biomolecules

139
Q

Turn over of biomolecules occurs through _______

A

chemical reactions aka metabolism

140
Q

removal of CO2 from amino acids making an amino acid into an amine is an example of?

A

metabolic reaction

141
Q

hydrolysis of a glycosidic bond in disaccharide is an example of?

A

metabolic reaction

142
Q

Most metabolic reactions occur in isolation. T or F?

A

False, series of linked reactions (hence metabolic pathways)

143
Q

Metabolic pathways can be _____ or _______ and always _____ each other

A

linear or circular, always criss-cross each other

144
Q

Metabolic pathways are compared to what real-life phenomenon?

A

Traffic

145
Q

Metabolic pathways have a definite ____And ____

A

rate and direction

146
Q

Metabolite flow is called __________

A

dynamic state of body constituents

147
Q

Every metabolic reaction in living systems is catalysed, even physical processes. T or F?

A

True

148
Q

Catalysts which hasten rate of metabolic conversations are also ________ and named ______

A

proteins, named enzymes

149
Q

Anabolic vs. catabolic pathways?

A

Anabolic - simple to complex, consumes energy

Catabolic - complex to simple, releases energy, trapped and stored as chemical bonds

150
Q

Anabolic pathways are aka _______

A

biosynthetic pathways

151
Q

Anabolic or catabolic?

Amino acids => proteins
Glucose => lactic acid
Acetic acid => cholesterol

A

Amino acids => proteins - anabolic
Glucose => lactic acid - catabolic
Acetic acid => cholesterol - anabolic

152
Q

When glucose is degraded to lactic acid, it is called _____ and occurs in how many steps?

A

glycolysis, 10 steps

153
Q

Stored bond energy is utilised for biosynthetic, osmotic and mechanical work in the body as and when required. T or F?

A

True

154
Q

Most important form of energy currency is _______

A

bond energy in a chemical called adenosine triphosphate (ATP)

155
Q

Blood concentration of glucose in healthy individual is __________

A

4.2 - 6.1 mmol/L

156
Q

Concentration of hormones in normal healthy person is measured in ________

A

nanograms / mL

157
Q

Most important fact of biological systems is ____________

A

all living organisms exist in a steady-state characterised by concentrations of each of the biomolecules

158
Q

Biomolecules in our bodies are in a state of __________ flux

A

metabolic

159
Q

The steady state (or “living state”) in human beings is an equilibrium state where you will find biomolecules in specific ranges of quantities. T or F?

A

False, steady state = non-equilibrium… system is continuously working (metabolism)

160
Q

Living process is a constant effort to prevent falling into equilibrium. T or F?

A

True

161
Q

How is living state achieved?

A

energy input from metabolism

162
Q

All enzymes are proteins. T or F?

A

False, ALMOST all enzymes, some nucleic acids can be enzymes too (ribozymes)

163
Q

One can depict enzyme by _____ diagram

A

line

164
Q

An enzyme, like any protein, has primary, secondary and tertiary structures. T or F?

A

True

165
Q

In a tertiary structure, the backbone of a protein folds upon itself, criss-crosses itself, and hence many _______ are made. These are called “__________”.

A

crevices / pockets.

“active sites”

166
Q

_______ fits into an active site of an enzyme

A

substrate

167
Q

Enzymes, through their ________, catalyse reactions at a high rate.

A

active sites

168
Q

What is one major difference b/w enzyme catalysts and inorganic catalysts?

A

Enzymes get damaged at high temperatures (above 40° C), while inorganic catalysts work efficiently at high temps and high pressures.

169
Q

Enzymes isolated from _________ organisms are stable at high temps (80°-90° C)

A

thermophilic organisms (live in hot vents and sulphur springs)

170
Q

Chemical compounds undergo 2 types of changes:

A

physical (change in shape, no breaking of bonds) and chemical (breaking and forming of bonds)

171
Q

Ba(OH)2 + H2SO4 -> BASO4 + 2H2O

is organic or inorganic chemical reaction?

A

Inorganic

172
Q

Hydrolisis of starch into glucose…

is organic or inorganic chemical reaction?

A

Organic

173
Q

What is the rate of a physical / chemical process?

A

Amount of product formed per unit time.

r = delta P/ delta t

174
Q

If direction is specified, rate can also be called ______

A

velocity

175
Q

Rates of physical and chemical processes are affected by temperature. T or F?

A

True

176
Q

General rule of thumb is that rate increases by ______ for every _____°C increase of temperature.

A

doubles, 10°C

177
Q

CO2 + H20 -> H2CO3 (carbonic acid)

What is the rate of uncatalysed reaction? Catalysed?

A

Uncatalysed - 200 molecules of carbonic acid formed in an hour
Catalysed - 600,000 molecules per second

(10 million times faster)

178
Q

What is the enzyme associated with converting CO2 and water to carbonic acid? By how much does using an enzyme increase the rate of the reaction?

A

Carbonic anhydrase, 10 million times

179
Q

A multistep chemical reaction where each step is catalysed by the same enzyme complex or different enzymes is called a ___________

A

metabolic pathway

180
Q

Glucose -> 2 Pyruvic acid is an example of:

physical reaction - metabolic pathway - single-enzyme reaction - single-step reaction

A

metabolic pathway

181
Q

Glucose becomes pyruvic acid through how many enzymes?

A

10

182
Q

The glucose to pyruvic acid metabolic pathway can yield what end product in human body under anaerobic conditions? aerobic? in yeast?

A

anaerobic - lactic acid
aerobic - pyruvic acid
yeast - ethanol

183
Q

Chemical converted to a product in a reaction is called ________

A

substrate

184
Q

What does S —> P symbolize?

A

Chemical conversion of substrate to product (in enzymes, via active sites)

185
Q

Formation of an ‘ES’ complex is a __________ phenomenon

A

transient

186
Q

During the state where S is bound to E active site, a new structure of substrate called ______ is formed

A

transition state structure

187
Q

Pathway of S -> P transformation must go through the ________________

A

transition state structure

188
Q

In S -> P, there could be many altered structural states between the stable substrate and product. T or F?

A

True

189
Q

When there are multiple transition state structures, all intermediate structures are stable. T or F?

A

False, unstable

190
Q

Stability is something related to the _____ status of the molecule / structure.

A

energy

191
Q

If P is at lower level than S, the reaction is ________.

If S is lower level than P, then reaction is ________.

A

Exothermic/spontaneous

Endothermic/energy-requiring

192
Q

Only in endothermic reactions, where P is higher than S, S has to go through a much higher transition state. T or F?

A

False, in both endothermic and exothermic reactions.

193
Q

Enzymes ______ the energy barrier making transition of S to P much easier

A

bring down

194
Q

Formation of ES complex is short-lived. T or F?

A

True

195
Q

What is EP?

A

intermediate formation of enzyme-product

ES -> EP -> E + P

196
Q

Describe the catalytic cycle of enzyme reaction:

A
  1. substrate binds to active site
  2. induces the enzyme to alter its shape, fitting more tightly around substrate
  3. active site is now in close proximity of substrate -> breaks chemical bonds -> EP is formed
  4. enzyme releases products, ready to bind to another molecule of substrate
197
Q

What are the 4 factors affecting enzyme activity?

A
  1. pH
  2. temperature
  3. concentration of substrate
  4. binding of regulators
198
Q

Enzymes function in a wide range of temperature and pH. Outside this range it is inactive or destroyed. T or F?

A

False, narrow range, everything else correct

199
Q

Temp / pH where enzyme shows its highest activity is called ___________ temp/pH

A

optimum

200
Q

Low temperatures _________ the enzyme whereas high temperatures ______ the enzyme because __________

A

preserve/inactivate,
destroy,
proteins are denatured by heat

201
Q

With the increase in substrate concentration, __________ of reaction increases at first.

A

velocity

202
Q

What is max velocity in enzymatic reaction?

A

rate of reaction is not increased by any further rise in concentration of substrate because no free enzyme molecules left to bind with additional substrate

203
Q

Max velocity is reached when substrate molecules are greater than enzyme molecules. T or F?

A

True

204
Q

What are inhibitors/inhibition?

A

when binding of chemical shuts off enzyme activity

205
Q

What is competitive inhibitor? Example

A

When inhibitor closely resembles substrate in molecular structure and inhibits enzyme activity.
e.g. inhibition of succinate dehydrogenase by malonate (substrate is succinate)

206
Q

Competitive inhibition is used in the control of _________ pathogens

A

bacterial

207
Q

Enzymes are divided into ____ classes each with ______ subclasses and named accordingly by a ___-digit number

A

6, 4-13, four-digit

208
Q

What are the 6 classes of enzymes?

A
Oxidoreductases/dehydrogenase
Transferase
Hydrolase
Lyase
Isomerase
Ligase
209
Q

What are oxidoreductases? aka?

A

enzymes which catalyse oxidoreduction b/w 2 substrates. aka dehydrogenase

210
Q

What are transferases?

A

enzymes which catalyse transfer of a group, G (other than hydrogen) between a pair of substrates

211
Q

What are hydrolases?

A

enzymes which catalyse hydrolysis of ester, ether, peptide, glycosidic, C-C, C-halide or P-N bonds

212
Q

What are lyases?

A

enzymes which catalyse removal of groups from substrates by mechanisms other than hydrolysis leaving double bonds

213
Q

What are isomerases?

A

enzymes which catalyse inter-conversion of optical, geometric or positional isomers

214
Q

What are ligases?

A

enzymes catalysing the linking together of 2 compounds e.g. joining of C-O, C-S, C-N, P-O

215
Q

Match the reactions to the class of enzymes?

  1. S-G + S’ –> S’-G + S
  2. X-C-C-Y –> X-Y + C=C
  3. S reduced + S’ oxidised –> S oxidised + S’ reduced
A
  1. Transferase
  2. Lyase
  3. Dehydrogenase / oxidoreductase
216
Q

Enzymes are composed of one or several __________ chains

A

polypeptide

217
Q

What are co-factors?

A

non-protein constituents
often bound to enzyme
make enzyme catalytically active

218
Q

What is apoenzyme?

A

Protein portion of the enzyme (when co-factors are present)

219
Q

3 kinds of cofactors?

A

prosthetic
co-enzymes
metal ions

220
Q

Prosthetic groups?

A

co-factors of enzymes,
organic compounds,
tightly bound to apoenzyme

221
Q

Co-enzyme?

A

co-factor of enzyme,
organic compound,
association with apoenzyme is only transient during the catalysis

222
Q

Essential elements of many co-enzymes are ________

A

vitamins

223
Q

Coenzyme nicotinamide adenine dinucleotide contains __________ vitamin

A

niacin

224
Q

Metal ions as co-factors?

A

form coordination bonds with side chains at the active site

and coordination bonds with substrate

225
Q

Catalytic activity is lost when co-factor is removed. T or F?

A

True

226
Q

Match the following to the right group of co-factors and name the GROUP of the co-factor.
1. Peroxidase and catalase - breakdown of hydrogen peroxide to water and O2
2. NAD and NADP
3. proteolytic enzyme carboxypeptidase
Options: Niacin - Zinc - Haem

A
  1. Haem - prosthetic
  2. Niacin - co-enzyme
  3. Zinc - metal ion
227
Q

Although there is bewildering diversity of living organisms, their chemical composition and metabolic reactions appear to be remarkably similar. T or F?

A

True

228
Q

There are _____ types of amino acids and ____ types of nucleotides

A

20, 5

229
Q

Lipids because of association with _______ separate in the macromolecular fraction

A

membranes

230
Q

__________ enzymes exhibit substrate specificity

A

proteinaceous enzymes

231
Q

Enzymes increase or lower the activation energy of reactions?

A

Lower

232
Q

Carbohydrates (sugars) are chemically defined as ______________ or ______________

A

polyhydroxy aldehyde, ketones

233
Q

All sugar molecules have one ______________ group in addition to a ______________ group on other carbon atoms.

A
carbonyl group (-CO-) 
hydroxyl group (OH)
234
Q

Neutral or true fats are ______________ (mono/di/triglycerides) which are formed by esterification of ______________ molecules of fatty acids with one molecule of ______________

A

triglycerides,
3,
trihydric alcohol, glycerol (glycerine or trihydroxy propane)

235
Q

Basic amino acids have an additional amino group without forming ______________ thus they are ______________

A

amides, diamino monocarboxylic acids

236
Q

Major role of minor elements inside living organisms is to act as ______________

A

co-factors of enzymes

237
Q

Spoilage of oil can be detected by which fatty acid?

A

Erucic acid

238
Q

Essential amino acid is?

phenylalanine - glycine - aspartic acid - serine

A

phenylalanine

239
Q

Water present in human body is ______________

A

65-70%

240
Q

Water present in living cell is ______________

A

70-90%

241
Q

Proteins in living cell is ______________

A

10-15%

242
Q

Carbohydrates and lipids in living cells are ______________ and ______________ respectively

A

3%

2%

243
Q

Nucleic acids make up ______________% of living cells

A

5-7%

244
Q

Ions make up ______________% of living cell mass

A

1%

245
Q

Nicotine, strychnine and caffeine are used as ______________ in plants

A

defense mechanisms

246
Q

Which of the following have carbohydrate as prosthetic group?

Glycoprotein - lipoprotein - chromoprotein - nucleoprotein

A

Glycoprotein

247
Q

Sucrose is a ______________ (mono / disaccharide)

A

disaccharide

248
Q

Glycine is a sulphur containing amino acid. T or F?

A

False

249
Q

Which of the following is a non-reducing carbohydrate?

Maltose - sucrose - lactose - ribose 5-phosphate

A

Sucrose

250
Q

Macromolecule chitin is a _________-containing polysaccharide

A

nitrogen

251
Q

Carbohydrates are commonly found as starch in plant storage organs because they are ______________ and ______________

A

chemically non-reactive, osmotically inactive

252
Q

Cellulose is a major component of cell walls of:

pseudomonas - saccharomyces - pythium - xanthomonas

A

Pythium

253
Q

Carbohydrates, the most abundant biomolecule on earth, are produced by __________, algae and green plant cells.

Fungi, some bacteria or all bacteria?

A

some bacteria (that contain chlorophyll)

254
Q

Galactose is a ______________ (reducing / non-reducing) sugar

A

reducing

255
Q

Cellulose, the most important constituent of plant cell wall is made up of:

A

unbranched chain of glucose molecules linked by β-1, 4 glycosidic bond

256
Q

Lactose is composed of ___________

A

glucose + galactose

257
Q

Which purine base is found in RNA?

thymine - uracil - cytosine - guanine

A

Guanine (says PURINE!!)

258
Q

Ramachandran plot is used to confirm the structure of ___________

A

proteins

259
Q

Which of the following is least likely to be involved in stabilising the 3-D folding of most proteins?

A

Ester bonds

260
Q

In double helical structure of DNA, density of DNA decreases on heating. T or F?

A

True, as hydrogen bonds breakdown

261
Q

In double helical structure of DNA, A + T/C + G is not constant. T or F?

A

False, it is constant for a species, may vary species to species

262
Q

In double helix of DNA, two DNA strands are coiled around ___________

A

a common axis

263
Q

Modern detergents contain enzyme preparations of ___________

A

alkaliphiles (alkaline protease for removing protein stains)

264
Q

Feedback inihibition is inhibition of the activity of an enzyme catalysing some early reactions of the series by the ___________

A

end product of the metabolic pathway