Lec 8 Flashcards
Isolating proteins purpose
Proteins can be isolated from tissues, cells or organelles
Groups
Experimental group
Positive/Negative control
Negative- event should not occur
Technical control- Allow you to quantify the results of all groups
SDS PAGE
Separate protein by size by moving them toward a positive electrode
Done by coating all proteins with a negative charge because not all proteins are negative on their own
Next, hinder the protein movement with a fibrous gel
The proteins will move towards the electrode but are slowed down by the fibers
The smaller proteins will move faster through the gel
SDS page
Lane
Because the proteins are trying to take the shortest route, they run in a lane
SDS page
Band
Where the proteins end up
Lanes can have multiple bands
Coomassie blue staining
Shows all proteins on a gel
Soaking gel with coomassie blue reveals proteins
Technical control of SDS page
Molecular weight marker (lane)
Tells us the size of our band
Use proteins with known sizes
Western blotting
Shows a specific protein on a gel
Each band shows many copies of one protein
Transfer the proteins onto a membrane (blotting)
All proteins can be seen on the membrane including YFP
Detected using antibody attached to an enzyme
Any antibodies that didnt stick are washed off, only leaving YFP
Detection reagents are added and when reacted with the enzyme, make a blue precipitate
Loading control
Type of technical control
Antibodies against a protein that should be present in all samples
Molecular weight markers work for
Western blots and Coomassie blue staining