L08: Intorduction Of Viruses Flashcards
What scheme is used to classify viruses
Baltimore scheme
What does the baltimore scheme classify viruses depending on
Rna or dna
Double strand or single strand
Is there a reverse transcriptase
Sense (like mRNA) or antisense
How many groups are there in the Baltimore scheme
7
What is group 1
Double stranded DNA
What is group 2
Single stranded DNA
What is group 3
Double stranded rna
What is group 4
Sense RNA
What is group 5
Antisense RNA
What is group 6
RNA reverse transcribing
What is group 7
DNA reverse transcribing
Describe the viral life cycle
1) virus glycoproteins interact with the cells surface receptor
2) this enables receptor mediated endocytoses so virus enters cytoplasm
3) virus capsid with genetic material is transported to the cells nucleus
4) nucleic acids become, transcribed, transplanted, replication.
5) envelopment of genome
5) new protein/virus becomes assembled and released out of the cell.
Why is it important to know every stage of virus replication
So we can target it by drugs against them
What are drug target for viruses
Virion uncoating DNA polymerase Reverse transcriptase Viral protease Viral neuraminidase Inositol monophospahte dehydrogenase
What are the most clinically important viruses
Influenza virus
Hepatitis b and c
HIV
Herpes virus
What are the features of influenza
Enveloped
With glycoproteins of haemaglutinin and neuraminidase
Single RNA genome
What are the 3 types of influenza that infect humans
Influenza a: cause pandemic
Influenza b: cause seasonal epidemics
Influenza c: cause mild respiratory illness
What is influenza virus divided into subtypes depending on
Haemoglutinin or neuraminidase
What receptor does the haemagglutinin interact with in the airway epithelium
Alpha 2,6 Sialic acid
Why does influenza of haemaglutinin give repeated infections
Neutralising antibodies that stop haemooglutinin from binding to alpha 2,6 sialic acid stops working due to antigenic variation
What are the 2 types of antigenic variations
Antigenic shift
Antigenic drift
What is an antigenic drift
1) Small changes in the genes of influenza that happen continuously
2) the viruses accumulate overtime and generate proteins that have haemolgutinin mutated so neutralising antibodies do not recognise it
3) influenza therefore enters cells.
Why do mutations of virus genes occurs
Rna viruses have to replicate its RNA genome by RNA polymerase which lacks proofreading compared to DNA polymerase so they have greater mutations.
What is antigenic shift
This is not about mutation
A cell with 2 different viruses have there virus segments completely swapped
This results in a new virus.
How can antigenic shifts occur
Virus from birds get into pigs
Human influenza gets into pigs
What does antigenic shift cause
Pandemic