persistent and chronic infections Flashcards

1
Q

if antibiotics were 100% effective then all infections would

A

cleared

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2
Q

bacterial populations contain

A

peristers

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3
Q

persister cells

A

phenotypic variants that constitute approx 1% of cells in stationary phase and biofilm culture. They are multi drug tolerant and largely responsible for the inability of antibiotics to completely eradicate infections

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4
Q

when were persister cells first recognised

A

1940

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5
Q

presence of persists cells

A

may be important in the aetiology of many recalcitrant infectious diseases

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6
Q

when antibiotic are given

A

regular cells will decreases, until just persisters and resistant matts are left resistant mutants will continue to reproduce, whilst persister levels will never change

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7
Q

when antibiotics are removed

A

persister cells are able to regrow

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8
Q

why aren’t persistrcells resistant mutants

A

they won’t grow in the presence of antibiotics

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9
Q

persister cells are not

A

genetically different

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10
Q

formation of persister rapidly increases during

A

mid-exponential phase m several species, but the mechanism that underlies this remains a puzzle

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11
Q

since persister cells are genetically identical to susceptible bacteria

A

they are phenotypic variants of the wild type

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12
Q

how are persister cell isolated

A

by applying a lethal dose of antibiotics to a growing cult,.

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13
Q

after removal of antibiotics persisters can regrow and give rise to

A

antibiotic sensitive cells that are genetically identical to the original population

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14
Q

what indicates that the optimal individual strategy is not to enter into persistence

A

that fact that most E.coli cells in the stationary phase population are non persisters

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15
Q

why is presser state thought to be altruistic behaviour

A

since being persister is not optimal and benefits kind

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16
Q

persister cells in biofilms are able to

A

regrow after cessation of antibiotic therapy, whereas planktonic cells are not

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17
Q

an approach to treat persisters

A

to serially reduce the conc of antibiotics thereby generating fewer numbers of persisters with each round of treatment

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18
Q

how do we identify persisters from a population if they are non growing

A
  • add antibiotics
  • kill all non-persister cells
  • will be left with just persister cell

Time consuming and microscopy is expensive

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19
Q

FACS

A

fluorescence activating cell sorting

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20
Q

FACS more

A

-seperates cells on size and colour- can show which populations show most fluorescence- the less fluorescent the more likely to be persistent.

21
Q

the less fluorescent the

A

more likely to be persistent

22
Q

how does FACS work

A

promotors will drive the transcription of GFP (edit promotes to make it active). Persister cels won’t produce GFP since they aren’t growing, therefore they can be seen in phase contrast (smaller), but will not fluoresce since they parent growing.

23
Q

fluorescence dilution

A

FD can be used to track non-replicating persister in infected hosts. Bacterial cells are loaded with fluorescent protein, once induction is switched off, dilution of the pre-formed pool of fluorescent protein will report the extent of bacterial replication. The lack of FD is a mark for the absence of replication

24
Q

Why is the lack of FD a marker for the absence of replication

A

if persister, it won’t be replicating, so fluoresce should stay the same conc. If normal, then the fluorescence should fade after every division, until no fluoresce

25
single cell analysis such as microscopy, flow cell cytometry or microfluidics can reveal
a diff picture with respect to the population
26
it is thought that persister are produced by a
stochastic (random) procesws
27
2 processes control persister formation
- a stochastic fluctuation in the lede, of persister proteins - a controlled, regulated mean level of expression of these proteins- dependent on the density of the pop. and other factors
28
environment sets the baseline over
which stochastic fluctuation of expression will take place
29
the simplest route to form a dormant persister cell might be through..
the over production of proteins that are toxic to the cell and inhibit growth-toxins
30
Toxin antitoxin systems
plasmid or chromosomal located gene locus, consisting of toxin and antitoxin. Three classes of TA systems based on gene products
31
type 2 TA system
gene products are proteins. | Free toxin binds to intracellular target to cause phenotypic change
32
Antitoxin bind to form TA complex and prevents
toxin activity
33
environment may degrade the anti toxin
the toxin is liberated and this will cause growth arrest- cell death
34
toxins inhibit
DNA replication, protein or peptidoglycan stones to cause dormancy or cell death --> leads to growth arrest
35
antitoxins are more ..... than toxins
unstable
36
example of genes that caused growth arrest in E.coli
HicA
37
HicA expression increased
persister frequencies
38
reintroduction of HicB leads to
restoration of growth
39
are all persisters dormant
evidence for various active mechanisms of antibiotic tolerance such as detoxification through efflux pumps or lower antibiotic take up
40
persistance
the ability of bacteria to remain viable in the host for a prolonged period of time. Not to be confused with bacterial persistance
41
bacterial persisters
cells that represent a subset of antibiotic tolerance; persisters are sub population of slow-growing or growth-arrested bacterial cells that ave a decreased susceptibility to killing by bactericidal antibiotics within an otherwise susceptible clonal population, owing to a low target activity or low antibiotic uptake that is induced by stress
42
are all cells equal- which method should we consider
western blot of different BCG extracts
43
BCG
Bacillus Calmette Guerin
44
are all cells equal experiment
western bootof off diff BCG extracts probed with antibody against the surface protein MPB83 - on first appearance it seems that BCG Japan produces more MPB83 then BCG russia - white, low producers - grey, medium producers - black, high producers
45
microscopy, flow cell cytometry or microfluidics can
reveals a diff pict with respect to the population.
46
single cell analysis techniques
microscopy, flow cell cytometry or microfluidics
47
how are TA systems related to persister cell formation
Recent studies have demonstrated that gene loci known as toxin-antitoxin (TA) modules play a central role in the persister state. Under normal growth conditions, antitoxins potently inhibit the activities of the toxins. In contrast, under conditions of stress, the antitoxins are selectively degraded, freeing the toxins to inhibit essential cellular processes, such as DNA replication and protein translation. This inhibition results in rapid growth arrest.
48
toxins that usually cause cell arrest but be
counteracted by an antitoxin- this occurs all the time
49
antibiotics cause
antitoxins to be released from toxins, meaning they can have their potent effect own the cell, causing inhibition of DNA replication and protein translation- growth arrest