The Chemistry of Life Flashcards
atoms
smallest unit of elements
atomic number
proton number
ions
charged atoms
cation
overall positive
anion
overall negative
electron
negative charge
negligible mass
proton
positive charge
1 atomic mass unit
neutron
neutral charge
1 atomic mass unit
isotope
same number of protons
different number of neutrons
molecules
two or more atoms bonded together
molecular formula
ex. H2O
isomers
different molecular structures
functional groups
shared chemical properties
organic molecules
hydrogen and carbon
inorganic molecules
maybe carbon
no associating hydrogen
all cells are an
aqueous solution
parts of an aqueous solution
solvent
solute
concentration
solvent
dissolving agent
solute
dissolved substance
concentration
amount solute/unit solvent
pH (potential hydrogen)
measurement of overall acidity or basicity of solution
pH scale
0 - 14
salts
form when acids and bases react with each other
preferred pH for biochemical reactions
7.0
acids contribute
free protons
bases contribute
free hydroxyl groups
chemical bonds
forces that bind atoms in molecules
valence electrons
found in outer electron shell
ionic bonds
not very strong
oppositely charged ions
electrolytes
covalent bonds
very strong
share one or more pairs of electrons
polar covalent bond
unequal electron sharing (dipole)
can be used for other chemical reactions
ex. oxygen
hydrogen bond
noncovalent interaction between dipoles
intermolecular
2 or more molecules
intramolecular
within large molecule
chemical reactions
making and/or breaking of chemical bonds
catalyst
increases rate of reaction
synthesis reactions
build by combining reactants
dehydration synthesis
water released/lost
ex. peptide bonds
decomposition reactions
break down substances
hydrolysis
adding water to break covalent bonds
exchange reactions
swapping one or more components in a compound
energy
chemical reactions consume or release energy
collision between atoms/molecules
reactants must be in proper orientation
activation energy
energy needed for a reaction to occur
exergonic reactions
release energy
endergonic reactions
use energy
equilibrium
not a static state
biological macromolecules
carbohydrates
lipids
nucleic acids
proteins
polymerization
covalently linking monomers
carbohydrates
organic molecules with at least one sugar monomer
2:1 ratio of H:O
linked by glyosidic bond
formed by dehydration synthesis
broken by hydrolysis
carbohydrates functions
chief energy source
structural roles
mediators of adhesion, communication, sensing
lipids
organic molecules of C, H, O
fats, oils, waxes, steroids
hydrophobic
amphipathic
both hydrophobic and hydrophilic
saturated lipids/fats
solid at room temp
no double bond
unsaturated lipids/fats
liquid at room temp
double bonds
fats and oils function
energy
structural role
cell signalling
glycoprotein function
linked to carbs
lipoprotein function
linked to proteins
waxes function
protective
occassional energy source
steroids function
cell signaling
structural role
nucleic acids
genetic blueprint
DNA
RNA
nucleic acid function
DNA/RNA = genetic blueprint
RNA makes proteins, ribosomes
ribonucleotides = energy (ATP)
nucleic acid bonds
phosphodiester bonds
proteins
“workhorse” of the cell
amino acids
R groups (change between amino acids)
peptide bonds
protein functions
every biological function
protein folding
primary
secondary
tertiary
quaternary
chaperones
aid in folding
primary structure
peptide bonds link amino acids
secondary structures
alpha helices
beta sheets
tertiary structures
3D structures
noncovalent and covalent structures
quaternary structure
2+ polypeptide chains link