MCAT BIOCHEM Part 3 Flashcards

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1
Q

The enzymes of the Krebs cycle and the pyruvate dehydrogenase complex are located in the ___

A

matrix

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2
Q

The enzymes of the electron transport chain and ATP synthase are bound to the __

A

inner mitochondrial membrane

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3
Q

The two goals of the electron transport or oxidative phosphorylation are to:

A
  1. reoxidize all the electron carriers reduced in glycolysis, PDC, and the Krebs cycle
  2. Store energy in the form of ATP i nthe process
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4
Q

The ___ is a group of five electron carriers. Each reduces the next member down the line.

A

Electron transport chain

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5
Q

The first electron carrier in the electron transport chain is ___

A

NADH dehydrogenase it oxidizes NADH to NAD+

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6
Q

The reason cyanid is a poison is that it inactivates cytochrome C oxidase by binding to its active site with high affinity. When a person is exposed to cyanide what happens?

A

The electron transport chain ceases to transport electrons and therefore ceases to pump protons

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7
Q

Each molecule of NADH provides the energy to produce approximately ___

A

2.5 ATP molecules

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8
Q

The ETC must pump ___ protons to produce 1 molecule of ATP

A

4 protons

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9
Q

FADH2 gives its electrons to ___

A

ubiquinone

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10
Q

FADH2 pumps ___ protons across the inner membrane

A

6 protons

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11
Q

FADH2 oxidation to FAD only produces___ ATP

A

1.5

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12
Q

The electrons of NADH produced in glyoclysis must be transported into the mitochondria before they enter the ETC by a pathway termed the __

A

glycerol phosphate shuttle

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13
Q

The glycerol phosphate gives electrons from NADH directly to ___

A

ubiquinone

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14
Q

Cytosolic NADH from glycolysis only produces

A

1.5 molecules of ATP

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15
Q

Krebs cycle produces ___,___,and ___

A

6 NADH
2 FADH2
2 GTP

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16
Q

The Pyruvate Dehydrogenase Complex produces ___

A

2 NADH

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17
Q

The total number of ATP for cellular respiration is

A

30 ATP

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18
Q

In energy-starved states ___ levels activate PFK while inhibiting F-1,6-BPase, resulting in enhanced glycolsysi activity and a suppression of gluconeogenesis

A

AMP

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19
Q

Skeletal muscle lacks glucose-6-phosphatase the absence of this enzyme__

A

keeps glucose phosphorylated and unable to leave the muscle cell

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20
Q

The enzyme ____ is required to transport glucose in the bloodstream

A

Glucose-6-phosphatase

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21
Q

___ are composed of long unsubstituted alkanes that end in a carboxylic acid

A

Fatty acids

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22
Q

____ are typically 14-18 carbons long and synthesized two carbons at a time from acetate, thus in humans ___ are even numbered predominantly

A

Fatty acids

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23
Q

___ have one or more double bond in the tail and they are almost always (cis) or (Z)

A

Unsaturated fatty acids

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24
Q

Triglyceride is composed of ____

A

three fatty acids esterified to a glycerol molecule

Glycerol is a three-carbon triol

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25
Q

Soaps are formed by base-catalyzed hydrolysis of triglycerides from animal fat into fatty acid salts, reaction called__

A

saponification

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26
Q

What are the two reasons fats are more efficient energy storage molecules than carbohydrates?

A
  1. Packing

2. Energy content

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27
Q

Describe the packing that makes fats more efficient than carbohydrates.

A

Hydrophobicity of fats allow them to pack together closer than carbohydrates.
Carbohydrates carry a great amount of water-of-solvation (water molecules hydrogen bonded to their hydroxyl groups)
Amount of carbon per unit area or unit weight is much greater in a fat droplet than in dissolved sugar

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28
Q

Describe why a fat has more energy content than a carbohydrate

A

A fat is much more reduced than a carbohydrate. Energy metabolism begins with the oxidation of foodstuffs to release energy. Since carbohydrates are more oxidized to begin with, oxidizing them reelases LESS energy

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29
Q

__ and ___ are the most common phospholipids in the eukaryotic cell

A

Phosphatidylcholine and phosphatidylethanolamine

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30
Q

___ is a major lipid component of lung surfactant (important in reducing surface tension inside lung alveoli)

A

Phosphatidylcholine

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31
Q

___drive formation of the bilayer

___ stabilized the bilayer

A

Hydrophobic interactions drive the bilayer, van Der Waals forces stabilize the bilayer

32
Q

Phospholipids composed of saturated fatty acids make the lipid membrane__

A

LESS fluid

33
Q

double bonds in phospholipid fatty acids tends to__

A

INCREASE membrane fluidity,

also decreasing the length of fatty acids increase fluidity

34
Q

___ is known as membrane antifreeze because at low temperatures, it increases the fluidity in the same way as kinks in fatty acid tails do

A

Cholesterol

35
Q

At high temperatures__ REDUCES membrane fluidity

A

Cholesterol

36
Q

The three structural determinants of membrane fluidity are

A
  1. Degree of saturation
  2. Tail length
  3. Amount of cholesterol
37
Q

A ___ is a member of a broad class of compounds built from isoprene units (C5H8)

A

Terpene

38
Q

___ exert their effects by binding to receptors at the cell-surface

A

Peptide hormones

39
Q

___ diffuse into the cell where their receptors are located

A

Steroid hormones

40
Q

___ is an important component of the myelin sheath around neurons,

A

Sphingomyelin (a type of sphingolipid)

41
Q

The four fat-soluble vitamins are

A

A,D,E, and K all ring structured

42
Q

___ is a terpenoid essential for vision, growth, epithelial maintenance, and immune function

A

Vitamin A

43
Q

___ is derived from cholesterol important in regulating blood levels of calcium and phosphate

A

Vitamin D

44
Q

__ is actually a group of compounds called tocopherols (methylated phenols) that are important as antioxidants

A

Vitamin E

45
Q

__ serves as an important coenzyme in the activation of clotting proteins

A

Vitamin K

46
Q

Fatty acid catabolism occurs in the __

A

mitochondrial matrix

47
Q

Fatty acid anabolism takes place in the

A

Cytoplasm

48
Q

What are the pKa for the three acid dissociation equilibria of phosphoric acid?

A

2.1, 7.2, 12.4

49
Q

ATP synthesis is driven by __

A

protons crossing the inner mitochondrial membrane through ATP synthase

50
Q

Fermentation is the reduction of ____

A

Pyruvate to lactate to generate NAD+ for continued glycolysis under aerobic conditions

51
Q

Citric acid cycle converts citrate to oxaloacetate through several intermediates including ___ ,__,__, and__

A

a-ketoglutarate, succinate, fumarate, and malate

52
Q

Firs step of glycogenolysis is__

A

glucose-1 phosphate is made and converted to glucose-6-phosphate through the enzyme phosphoglucomutase

53
Q

Degradation of glycogen occurs with process of _____

A

phosphorolysis which removes individual glucose sub units

54
Q

The first step of glycogen where glucose subunits are removed is catalyzed by __

A

glycogen phosphorylase

55
Q

What does the enzyme glycogen phosphorylase do?

A

Glycogen phosphorylase breaks a,1-4 bond by adding inorganic phosphate at carbon 1, Glucose-1-phosphate (G1P) released

56
Q

___ breaks bonds by adding inorganic phosphate groups across them

A

Phosphorolysis

57
Q

Glycolysis produces ___ ATP per glucose

A

2 ATP

58
Q

Gluconeogenesis consumes total of __ ATP equivalents

A

6 ATP

59
Q

The rate of glycolysis is largely controlled by ___

A

PFK-1 activity.

-When PFK-1 is active, glycolysis proceeds quickly

60
Q

PFK-1 is tightly regulated by several allosteric inhibitors and activators including

A

Allosteric inhibitors : ATP and citrate

Allosteric activators: ADP, AMP, and F2,6BP

61
Q

___decreases the rate of glycolysis and increases the rate of gluconeogenesis

A

Glucagon

62
Q

___reactions join two molecules together and release one or more water molecules in the process

A

Condensation rxn

63
Q

How does insulin stimulate glucose catabolism?

A
Glucose catabolism (glycolysis) by activating synthesis of fructose-2,6-bisphosphate (F2,6BP). 
F2,6BP allosterically ACTIVATES phosphofructokinase-1 (PFK-1) which catalyzes the rate limiting step of glycolysis

-In the liver F2,6BP inhibits fructose-1,6 bisphosphatase, which catalyzes the dephsphorylation of F1,6BP in gluconeogenesis

64
Q

The rate limiting step of glycolysis is ___

A

Phosphofructokinase-1 catalyzed

65
Q

What is the rate limiting step of Pentose phosphate pathway?

A

The conversion of Glucose-6-Phosphate to 6-Phosphogluconate by
Glucose-6 phosphate dehydrogenase

66
Q

What two enzymes in the Pentose phosphate pathway catalyze and produce NADPH?

A

Glucose-6-phosphate dehydrogenase

6-phosphogluconate dehydrogenase

67
Q

What are the three enzymes that are allosterically regulated in the Krebs cycle because they are irreversible?

A

Citrate synthase
Isocitrate dehydrogenase
a-ketoglutarate dehydrogenase

68
Q

The allosteric inhibitors of the three irreversible steps of the Krebs cycle are

A

NADH, ATP, Citrate, and succinyl-CoA

69
Q

The allosteric activators of the three irreversible steps of the Krebs cycle are _

A

ADP and Calcium

70
Q

What is the regulatory step enzyme for glycolysis?
What are positive regulators?
What are negative regulators?

A

Regulatory step enzyme of glycolysis: Phosphofructokinase
Positive Regulators: Fructose-2,6-bisphosphate, AMP
Negative regulators: ATP

71
Q

What is the regulatory step enzyme for gluconeogenesis?
What are positive regulators?
What are negative regulators?

A

Regulatory enzyme of gluconeogenesis: Fructose-1,6-bisphosphatase
Positive regulators: ATP
Negative Regulators: Fructose-2,6-bisphosphate, AMP

72
Q

Insulin stimulates both ___ and __

A

Glycolysis and Glycogenesis

73
Q

__ occurs in response to glucagon when blood sugar levels are low. Results in glucose being released from the liver into the blood where it can be uptaken by the cells and enter glycolysis

A

Glycogenolysis

74
Q

All amino acids are derived from __

A

L-glyceraldehyde

75
Q

The simplest (smallest) carbohydrate has only three carbons and one chiral center it is called__

A

glyceraldehyde

76
Q

All animal carbohydrates are chemically derived from __

A

D-glyceraldehyde