Chromosome Abnormalities, Mutations & Analysis Flashcards

1
Q

Types of Chromosome Abnormalities

A

Numerical
Structural
Mutational

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2
Q

Numerical

A

Trisomy

Monosomy

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3
Q

Trisomy

A

Patau
Edwards
Down
Klinfelter

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4
Q

Patau

A

47 XX +13

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5
Q

Edwards

A

47 XY +18

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6
Q

Down

A

47 XX +21

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7
Q

Klinefelter

A

47 XXY

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8
Q

Monosomy

A

Turner

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9
Q

Turner

A

45 X

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10
Q

Origins of chromosome abnormalities

A

Non-disjunction at meiosis I

Non-disjunction at meiosis II

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11
Q

Non-disjunction at meiosis I

A

2 gametes with disomy

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12
Q

Non-disjunction at meiosis II

A

2 normal gametes and one with disomy

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13
Q

Why are origins of non-disjunction maternal?

A

Females developing ova as developing babies and when they are born they have all their eggs
Arrested at meiosis I
Longer period of arrest = abnormalities

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14
Q

Characteristic of Trisomy 21 (5)

A
Downs
Distinct facial features
Low IQ
Increases in advanced maternal age
Unbalanced Robertsonian translocation
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15
Q

Characteristic of Trisomy 13 (5)

A
Patau syndrome
Mental retardation
Dysmorphic features
Maternal origin- non-disjunction
Unbalanced Robertsonian
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16
Q

Characteristic of Trisomy 18 (4)

A

Edwards syndrome
Severe developmental problems
Most patients die within first year
Non-disjunction (maternal)

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17
Q

Characteristic of Aneuploidy (Monosomy) Syndrome

A

Turner syndrome

appear females- short stature and infertile

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18
Q

Characteristic of 47 XXY

A
Klinefelter syndrome
Tall stature, long limbs
Male but infertile, small testes
Gynaecomastia
Mild learning difficulties
19
Q

Structural

A
Balanced or unbalanced rearrangements
Translocations
Deletions
Insertions
Inversions
20
Q

Outcomes of Balanced Translocation

A

Normal
Balanced
Partial trisomy + partial monosomy

21
Q

Reciprocal Translocation

A

Involving breaks in 2 chromosomes with formation of two new derivative chromosomes

22
Q

Robertsonian Translocation

A

Fusion of two acrocentric chromosomes

Loss of short arms

23
Q

Outcomes of Robertsonian Translocation

A

Trisomony (chromosome)

Monosomy (chromsome)

24
Q

Deletions

A

Interstitial

Terminal

25
Inversions
Paracentric | Pericentric
26
Pericentric
Piece involves Centromere
27
Genetic
Germ line or Somatic | Non-coding or Coding
28
Coding
Silent- codon change, aa stays the same Missense- amm changes Nonsense- stop codon Franeshift
29
Point Mutations
Transition | Transversion
30
Transitions
Purine to Purine | Pyrimidine to Pyrimidine
31
Transversions
Purine to Pyrimidine | Pyrimidine to Purine
32
Cys64Arg
• At position 64, mutation from Cys to Arg
33
M252X
• Mutation at position 252 to stop codon
34
1294del40
Deletion of 40 nucleotides at position 1294
35
1298A>G
Position 1298 mutation of A >G
36
662-42C>T
Introns use position of exons Position 662 -42 has mutation of C > T
37
IVS2+12insG
Position IVS2 + 12 nucleotides has insertion of G
38
Detecting Mutations
PCR Gel electrophiresis Restriction fragment length polymorphism analysis (RFLP) Amplification refractory mutation system (ARMS) DNA sequence
39
PCR
Oligonucleotide primers Denature Anneal primers and nucleotide Extend with DNA polymerase
40
Gel Electrophoresis
Separate DNA fragments by size Across electric field DNA is negatively charged
41
RFLP
Enzymes from bacterial cells Recognise specific DNA sequences (4-8bp) Cut DNA Requires gel electrophoresis or southern blot
42
ARMS
Normal primer matches= amplification of wild type Mutant primer = no amplification Mutant primer attaches= amplification of mutant alleles Normal primer= no amplification Electrophoresis required
43
DNA Sequence
Uses dideoxynucleotides ddATP, ddCTP, ddGTP, ddTTP Gold standard for mutation detection Uses gel electrophoresis