Replication Flashcards
Replication
synthesis of DNA from DNA
What direction doe the DNA strand read?
5’-3’
In replication, there is one old strand and one new strand, this is said to be
semi-conservative
What enzyme unwinds the DNA helix and separates the strands, forming the replication fork at the origin?
DNA helicase
How do the exposed strands stay stable after they unwind from the opposite strand?
single stranded binding proteins
In what direction does DNA polymerase synthesize DNA?
5’-3’
What does DNA polymerase need in order to start synthesizing?
RNA primase
Leading strand
The strand that synthesizes away from the origin of the replication fork. continuous replication
Lagging strand
the strand that replicates in the direction of the replication fork. discontinuous replication
Okazaki Fragments
The lagging strand has to keep being synthesized in fragments because it is going towards the replication fork and needs to keep going back.
What replaces the primer?
DNA polymerase 1
What seals up the phosphodiester backbone?
DNA ligase
What does topoisomerase do?
releaves tension of twist as it unwinds by cutting the backbone and resealing it.
What happens when there is not enough room to lay prime on 5’ end of lagging strand?
telomerase will take 3’ end of 5’-3’ and extend so that daughter strand an keep laying down primer and don’t loose and genetic material
What is the energy for replication?
nucleosidetriphosphates
DNA polymerase I
slow. replaces primers. 3’-5’ exonuclease activity if there’s a mistake (Proofreading). 5’-3’ exonuclease activity to take off primer
DNA polymerase III
Bulk of work. fast. 3’-5’ exonuclease activity if there is a mistake (proofreading)
Means of DNA repair
Proofreading, Nick translation (DNA pol I), Mismatch repair, base excision repair, nucleotide excision repair
nick translation
DNA pol I. Pulls off mistake as it’s replicating
Mismatch repair
Methylate the parent, recognize that the daughter is mistake, will cut out several daughter nucleotides. DNA pol III comes in a fixes it. Ligase seals backbone
Base excision repair
Exonuclease cuts the base off. DNA Pol I will fill in gap and Ligase will seal backbone.
nucleotide excision repair
Ex. UV light damage