microbiology ch 9 Flashcards
What is biotechnology?
The use of microorganisms, cells, or cell components to make a product
What are five examples of products made from biotechnology?
Foods, vaccines, antibiotics, vitamins, enzymes
What is recombinant DNA (rDNA) technology?
The insertion or modification of genes to produce desired proteins
This is the use of microorganisms/cells/cell components to make products such as foods, vaccines, antibiotics, vitamins, and enzymes
Biotechnology
This is the insertion or modification of genes to produce desired proteins
Recombinant DNA (rDNA) technology
What is a vector in recombinant DNA terms?
Self-replicating DNA molecule used to transport foreign DNA into a cell
What is a clone in recombinant DNA terms?
Population of genetically identical cells arising from one cell, each carrying the vector
These are self-replicating DNA molecules used to transport foreign DNA into cells
Vectors
These are populations of genetically identical cells arising from one cell that each carry a vector
Clones
What is the selection method of biotechnology?
Selecting a naturally occurring microbe that produces a desired product (aka artificial selection)
What is the mutation method of biotechnology?
Using mutagens that might result in a microbe with a desirable trait
What is site-directed mutagenesis?
Targeted and specific mutation of a gene
In this biotechnology approach, naturally occurring microbes that have desirable traits are selected
Selection
In this biotechnology approach, mutagens are used to result in microbes with desirable trait
Mutation
In this mutation biotechnology approach, specific changes in genes are targeted
Site-directed mutagenesis
What do restriction enzymes do?
Cut specific sequences of DNA and destroy bacteriophage DNA in bacterial cells
What do methylated cytosines in bacteria do?
Protect their own DNA from digestion
What two ways can restriction enzymes cut DNA?
Blunt or sticky ends
These cut specific sequences of DNA
Restriction enzymes
These destroy bacteriophage DNA in bacterial cells
Restriction enzymes
These protect bacterial DNA from digestion
Methylated cytosines
These cut DNA in blunt or sticky ends
Restriction enzymes
These carry new DNA to desired cells
Vectors
Must vectors be able to self-replicate?
Yes
What are two things that can be used as vectors?
Plasmids and viruses
What can shuttle vectors do?
Move cloned sequences among various organisms
These carry new DNA to desired cells and must be able to self-replicate
Vectors
Plasmids and viruses can both be used as these
Vectors
These can exist in several different species and can move cloned sequences among various organisms
Shuttle vectors
What is the polymerase chain reaction?
Process of increasing small quantities of DNA (amplifying) for analysis
What are two uses for the polymerase chain reaction?
Diagnosing genetic diseases and detecting pathogens
What does reverse-transcription PCR use as a template?
mRNA
This is the process of increasing small quantities of DNA for analysis and is used for genetic disease testing and pathogen detection
Polymerase chain reaction
This form of polymerase chain reaction uses mRNA as a template
Reverse-transcription PCR
What happens in the transformation method of inserting foreign DNA into cells?
Cells take up DNA from the surrounding environment
What happens in the electroporation method of inserting foreign DNA into cells?
An electrical current forms pores in cell membranes
What happens in the protoplast fusion method of inserting foreign DNA into cells?
Removing cell walls from two bacteria allows them to fuse
What determines which method to use in inserting foreign DNA into cells?
The vector used
In this method of inserting foreign DNA into cells, cells take up DNA from the surrounding environment
Transformation
In this method of inserting foreign DNA into cells, an electrical current forms pores in cell membranes
Electroporation
In this method of inserting foreign DNA into cells, cell walls are removed from two bacteria, allowing them to fuse
Protoplast fusion
What are two methods of physically inserting foreign DNA into cells using microscopic equipment?
Gene gun and microinjection
Gene guns and microinjection are two methods of doing this
Insert foreign DNA into cells
What is a genomics library?
Collection of clones containing different DNA fragments
In genomics libraries, how many clones exist for every gene in the organism?
At least 1
These are collections of clones containing different DNA fragments
Genomics libraries
In these, an organism’s DNA is digested and spliced into a plasmid or phage vectors and introduced into bacteria for storage
Genomics libraries
At least one of these exists for every gene in the a genomics library
Clone
What are two advantages to using E. coli to make gene products?
It is easily grown and its genomics are known
What are two disadvantages to using E. coli to make gene products?
It produces endotoxins and does not secrete its protein products
This bacteria is easily grown and its genomics are known, but it produces endotoxins and does not secrete its protein products
E. coli
What are three advantages of using Saccharomyces cerevisiae (yeast) to make gene products?
It is easily grown, has a larger genome than bacteria, and expresses eukaryotic genes easily
What are four advantages of using plant cells/whole plants to make gene products?
Plants express eukaryotic genes easily, are easily grown, can be grown on a large scale, and are low-cost
What are two advantages of using mammalian cells to make gene products?
Mammalian cells express eukaryotic genes easily and can make products for medical use
What is one disadvantage of using mammalian cells to make gene products?
Mammalian cells are harder to grow
What are subunit vaccines made from?
Pathogen proteins in genetically modified yeasts
What are DNA vaccines made from?
Nonpathogenic viruses carrying genes for a pathogen’s antigens
What is gene therapy used for?
To replace defective or missing genes
What can gene editing with CRISPR do?
Correct genetic mutations at specific locations
These are made from pathogen proteins in genetically modified yeasts
Subunit vaccines
These are made from nonpathogenic viruses carrying genes for a pathogen’s antigens
DNA vaccines
This can be used to replace defective or missing genes
Gene therapy
This is a form of gene editing that can be used to correct genetic mutations at specific locations
CRISPR
What is the process of gene silencing?
Small interfering RNAs (siRNAs) bind to mRNA, which is then destroyed by RNA-induced silencing complex (RISC)
What is the process of RNA interference (RNAi)?
DNA encoding siRNA is inserted into a plasmid and transferred into a cell
In this form of gene therapy, small interfering RNAs (siRNAs) bind to mRNA, which is then destroyed by RNA-induced silencing complex (RISC)
Gene silencing
In this form of gene therapy, DNA encoding siRNA is inserted into a plasmid and transferred into a cell
RNA interference (RNAi)
What is metagenomics?
The study of genetic material directly from environmental samples
What has the Human Genome Project done?
Sequenced the entire human genome
What will the Human Proteome Project do?
Map proteins expressed in human cells
This is the study of genetic material directly from environmental samples
Metagenomics
This project sequenced the entire human genome
Human Genome Project
This project will map proteins expressed in human cells
Human Proteome Project
What is bioinformatics?
Understanding gene function via computer-assisted analysis
What is proteomics?
Determining proteins expressed in a cell
This is the understanding of gene function via computer-assisted analysis
Bioinformatics
This is determining of the proteins expressed in a cell
Proteomics
This method is used in forensic microbiology to identify pathogens
DNA fingerprinting
What can PCR microarrays and DNA chips do in forensic microbiology?
Screen samples for multiple pathogens
What are three ways forensic microbiology differs from medicine?
Requires suppression of genes, the proper collection of evidence, and establishing a chain of custody
What is DNA fingerprinting used for in forensic microbiology?
Pathogen identification
These can both be used in forensic microbiology to screen samples for multiple pathogens
PCR microarrays and DNA chips
This differs from medicine as it requires gene suppression, proper evidence collection, and a chain of custody
Forensic microbiology
What is nanotechnology?
Making molecular/atomic-sized products
What kind of devices are usually used in nanotechnology?
Small mechanical devices
These organisms can be used to make molecule-sized particles in nanotechnology
Bacteria
What are nanospheres used for?
Drug targeting and delivery
What can Acebacter xylinum be used for in nanotechnology?
Building cellulose nanofibers for artificial blood vessels
This field makes molecular/atomic-sized products, typically small mechanical devices
Nanotechnology
What can bacteria be used for in nanotechnology?
Making molecule-sized products
These are a nanotechnology used in drug targeting and delivery
Nanospheres
These bacteria are used to build cellulose nanofibers for artificial blood vessels
Acebacter xylinum
What happens when mRNA and antisense RNA hybridize?
Protein synthesis is inhibited
What is antisense DNA?
DNA that is complementary to the DNA encoding a protein