chapter twenty-one/twenty-two Flashcards
how much of our genome is transcribed into mRNA, tRNA, and rRNA
1.5%
intergenic DNA
DNA between genes
- some unique, like pseudogenes
pseudogenes
former genes that have accumulated mutations and are nonfunctional
what is most DNA?
repetitive DNA
- present in multiple copies in the genome
types of repetitive DNA
- transposable elements and related sequences
- other repetitive DNA
transposable elements and related sequences
can move from one location to another within genome through recombination process
discovery of transposable elements
- geneticist Barbara McClintock
- worked with calico corn
- observed effects of mobile DNA pieces, moved from one site to another in cell’s DNA
- present in both proks/euks
2 types of transposable elements in eukaryotes
- transposons
- retrotransposons
transposons
- move via DNA intermediate
- cut/paste - no copy at original site
- copy/paste - leaves copy at original site
- requires enzyme transposes encoded by transposon
retrotransposons
- move via RNA intermediate
- converted back to DNA w/ reverse transcriptase
- always leaves copy at original site
- most
Alu-elements
transposable element-related DNA in humans/primates
- some transcribed, but function of RNA molecules unknown
- type of SINEs (short interspersed nuclear element)
LINEs
long interspersed nuclear elements
- type of retrotransposon
- like L1
- longer than Alu elements, low rate of transposition
what did other repetitive DNA probably arise from?
mistakes during DNA replication and recombination
types of other repetitive DNA
- long sequence duplications
- simple sequence duplications (STRs)
- multigene families
simple sequences duplications
many copies of tandemly-repeated units
- STRs
- common in centromeres and telomeres
STRs
short tandem repeats
- 2-5 nucleotide repeating units, repeating thousands of times
- repeat numbers can vary among sites within genome and btw ind
function of simple sequence DNA in centromeres and telomeres
- centromeres - separation of sister chromatids
- telomeres - protects against degradation, joining to other chromosomes
multigene families
collections of identical or very similar genes
- identical: rRNA genes clustered tandemly
- non-identical - globin gene families, dif forms of global expressed at dif times
polyploidy
extra sets of chromosomes
duplications and inversions
result from mistakes during meiosis
- unequal c-o during prophase I
what happens when gene family members get duplicated
some are used, other can accumulate mutations
exon duplication
can be duplicated on 1 chromosome and deleted from another
exon shuffling
mixing/matching of different exons within gene or between 2 dif genes