Chapter 14 - Genetics (Important Chapter) Flashcards
study of heredity
genetics
passing on characteristics from parents to offspring so they resemble parents and each other
heredity
actual expressed properties or charactertics
phenotype
organisms genetic makeup and total collection of genes
genotype
total genetic material in cell; all the cell’s DNA; all viruses’ DNA or RNA
genome
any factor affecting the expression of the phenotype other than the genes
eenvironment
functional unit of genetic information is the
gene
segment of DNA in cells which contains the coded information that determines the kinds of RNA
genes
all genes make blank
RNA
pathway from DNA to RNA to protein is gene expression
central dogma
bonds holding nucleotides together
phosphodiester bonds
DNA is usually blank stranded compared to RNA with blank
two , one
covalent bonds between the 3’ hydroxyl of one sugar a and a 5’ hydroxyl of another sugar make up the
sugar phosphate backbone
a virus either has blank or blank but never blank
DNA or RNA, both
DNA and RNA can be blank or blank in viruses
single or double stranded
viral blank can be linear or circular
nucleic acid
most viral genomes have between about blank and blank genes
20 and 100
viral genomes are packed within a protein coat called the blank
capsid
double helix is underwound
negative supercoiling
double helix is overwound
positive supercoiling
supercoiling packs DNA into a small
volume
prokaryotes have between about blank and blank genes
2000, 5000
eukaryotic genomes are always composed of blank DNA
double stranded
eukaryotic genomes are mostly blank with some blank
linear, circular
positively charged bunches that have DNA wrapped around them
histones
naked DNA is blank long
2 nm
nucleosomes are blank long
10 nm
solenoids are blank long
30 nm
nucleosomes, supercoils, and solenoids are part of the blank
eukaryotic genome
origin and is replicated as a unit of DNA
replicon
Archaea can have more than one blank in DNA
origin
type of RNA polymerase that makes the primer
DNA primase
DNA blank fills in cracks in DNA strand
ligase
DNA replication starts at the blank site
origin
pieces of primer are added to the DNA in small sections and when they are removed they leave gaps called blank
okazaki fragments
this separates the double stranded DNA into two opposite strands and uses ATP
helicase
DNA blank relieves tension so the replicated DNA does not break before completion
topoisomerase
the job of the primer is to supply a blank group so the main DNA can start being formed from there
hydroxyl
DNA ligase seals nicks in the blank
phosphodiester bonds
the leading strand uses blank synthesis of new DNA
continuous
the lagging strand has blank that form because it is not blank
okazaki fragments, continuous
The main polymerase in DNA replication
DNA polymerase III
DNA polymerase III is a complex of blank enzymes
10
DNA topoisomerase is aka
gyrase
DNA polymerase is always in the blank to blank direction
5’, 3’
proofreading is done by blank and is the removal of mismatched base from the blank end of the strand
DNA polymerase III, 3’
proofreading is not blank
100% efficient
some viruses may not have blank and just blank
DNA, RNA
linear sequence of nucleotides with a fixed start and end point
gene
nucleotide sequence in a gene that have the information for amino acid placement in a polypeptide
coding sequences
entire gene is continuous coding sequence in blank
prokaryotes
template strand of DNA directs blank synthesis
mRNA
template is read in the blank to blank direction
3’, 5’
the recognition and binding site for RNA polymerase that orients polymerase
promoter
synthesis of any RNA using DNA as a template
transcription
This mRNA is often found in Bacteria and Archaea
polycistronic
start codon
AUG
three stop codons
UAA, UAG, UGA
core enzyme + sigma factor =
holoenzyme
only the blank can begin blank
holoenzyme, transcription
the sigma factor of a holoenzyme has no catalytic activity but helps the core enzyme blank the start of genes (blank)
recognize, promoter
site of transcription initiation
promoter
promoter is the site where blank binds to initiate transcription
RNA polymerase
the -10 sequence is called the blank and the -35 sequence is called the blank. blank show up in these boxes
tata box, ttgac box, mutations
after binding, RNA polymerase unwinds the blank
DNA
eukaryotic transcription occurs in the blank
nucleus
three types of eukaryotic RNA polymerases
I, II, III
RNA polymerase I catalyzes blank synthesis
rRNA
RNA polymerase II catalyzes blank synthesis
mRNA
RNA polymerase III synthesizes blank molecules
tRNA
introns are removed from the initial RNA transcript by blank in eukaryotes
splicing
splicing of the pre RNA occurs in a large complex called a blank that contains pre mRNA
spliceosome
sometimes a pre mRNA is spliced so different patterns of exons remain, this is called blank
alternative splicing
these two things can happen simultaneously in prokaryotes because there is no blank
translation (ribosomes) and transcription, nucleus
the relationship between specific nucleotide sequence in a gene and a specific amino acid
genetic code
mRNA sequence is translated to amino acid sequence of polypeptide chain during blank
translation
sequence of three ribonucleotides in mRNA that determine a specific amino acid
codon
codons are complementary to DNA blank
triplets
the blank on tRNA is complementary
anticodo
start site for translation and is always blank
start codon, AUG
61 codons that specify amino acids
sense codons
the three codons used as translation termination signals and do not encode amino acids
non-sense codons (stop)
up to six different codons can code for a single amino acid
code redundancy
synthesis of polypeptide directed by sequence of nucleotides in mRNA
translation
site of translation
ribosom
this kind of transcription is in Bacteria and Archaea
coupled
tertiary structure due to base pairing within the tRNA molecule
transfer RNA
amino acid activation is blank by aminoacyl-tRNA synthetase
catalyzed
16S rRNA ribosomal binding site binds protein needed for initiation of blank
translation
23S rRNA is the blank subunit and is a blank that helps catalyze blank bond formation
large, ribozyme, peptide
sequential addition of amino acids to growing polypeptide
elongation cycle
elongation involves several blank factors
elongation
elongation has how many phases
three
- aminoacyl tRNA binding
- transpeptidation reaction
- translocation - ribosome movement
protein function depends on blank shape
3D
proteins that aid the folding of nascent polypeptides
molecular chaperones
protect cells from thermal damage
molecular chaperones