Lecture 34 Flashcards
what is the universal start codon
AUG - methionine
3 stop codons
UAA, UAG, UGA
how many codons are there
61
how many tRNAs are there
32
position 1 of anticodon dictates what
number of codons the tRNA can bind
how many codons for A or C
1
how many codons for U or G
2
how many codons for inosinate
3
wobble hypothesis
position 34 inosine may base pair with uridine, cytidine, adenosine
what must happen to tRNA
must be activated
tRNA activation catalyzed by
aminoacyl-tRNA synthtases
aminoacyl-tRNA synthetases require what
2 ATP
initiation of translation in bacteria requires what
30s subunit, mRNA, initiating fMet-tRNA, 3 initiation facts, GTP, 50S SU, Mg2+
region of mRNA that guides the initiating AUG to its correct position
Shine Dalgarno sequence
is shine dalgarno up or downstream from AUG
upstream
inserts N-formyl-methionine at the amino terminal end
fMet-tRNA
fMet-tRNA is added in response to wha t
AUG initiation codon
inserts methionine in interior positions
Met-tRNA
added in response to the interior AUG codons
Met-tRNA
bacterial ribosome, what Subunits
50s and 30s -> 70s
eukaryotic ribosome, what subunits
60s and 40s -> 80s
site where amino acids are added to the growing chain
peptide site (p site)
site where incoming aminoacyl-tRNAs bind
aminoacyl site (A site)
only site where fMet-tRNA can bind
P site
binds uncharged tRNAs
exit site
eukaryotic mRNAs are bound to
ribosome
eukaryotic cells have how many initiation factors
12
in eukaryotic cells, is there shine dalgarno seq
no
what is Met bound to in eukaryotic cells
initiation tRNA, not fMet
do eukaryotic cells have an exit site
no
more or less init factors in eukaryotic
more
elongation requires
initiation complex, aminoacyl-tRNAs, elongation factors, 2 GTP
what are the elongation factors
Tu, Ts, and G
where do uncharged tRNA leave directly from in eukaryotic
directly from p site
in bacteria, release factor and energy from GTP hydrolysis aid in what
ribosome dissociation
promotres dissociation of the tRNA and release factor
IF3
IF3 promotes dissociation of what
tRNA and release factor
inhibitory antibiotic that binds to the A site and terminates polypeptide synthesis
puromycin
puromycin structure similar to what
3’ end of aminoacyl-tRNA
inhibit bacterial protein by blocking the A site
tetracyclines