Lecture 1 Overview/Introduction Flashcards

1
Q

What is biochemistry

A

structure/function of proteins

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2
Q

what is biochemistry

A

DNA inheritance and expression

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3
Q

what is molecular biology

A

manipulation of DNA invetro

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4
Q

all lipids are what?

A

amphipathic

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5
Q

what two parts do lipids have

A

A hdryophobic part and a hydrophilic part

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6
Q

what is the common base for all lipids

A

glycerol

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7
Q

glycerol has how many carbons

A

3 carbons

2 are bound to fatty acids
1 is bound to a hydrophilic part

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8
Q

what are fatty acids

A

a chain of carbons with a carbon dioxide on one end

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9
Q

Fatty acids are classified as X:Y. What is X and what is Y

A

X is the number of carbons

Y is the number of double bonds

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10
Q

Ratios of the Fatty Acids: Myristate, Palmitate, Stearate, Arachidonate

A

14:0, 16:0, 18:0, and 20:4

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11
Q

What is a micelle, vesicle, and bilayer

A

Miscelle: solid ball
Vesicle: (liposome) small space inside the ball
Bilayer: cell membrane

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12
Q

why are lipids important in cell biology

A

they create compartments

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13
Q

The principle of technique of cell biology is?

A

microscopy (light or electron)

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14
Q

what is the primary structure of proteins

A

sequence of amino acids

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15
Q

Amino acids can be ____, _____, or _____

A

hydrophobic, polar, or charged

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16
Q

what is the secondary structure of proteions

A

1) random coil (no structure)
2) alphahelix
3) beta sheet (hydrogen bonds between different strands)

17
Q

What is the tertiary structure of proteins

A

A complete 3D structure that can fold independently and have a unique function

18
Q

what is the quaternary structure of proteins

A

if multiple proteins form 1 comlex

19
Q

what is protein binding

A

different bindings that forms the shape of a protein

20
Q

what determines if two proteins will bind?

A

shape and surface characteristics

21
Q

What are kinetics

A

The study of what reactions are thermodynamically favorable and how quickly they will occur

22
Q

What are chaperones?

A

Heat shock proteins what cover the hydrophobic parts of the protein while folding

23
Q

what are chaperonins?

A

proteins that use energy to jostle proteins to help it fold

24
Q

What is phosphorylation

A

the most important protein function in which PO4 is added

25
What are kinases
enzymes that add PO4
26
What are phospatases
enzymes that remove PO4
27
how are old organelles or proteins degraded
by the lysosome/vacuole
28
How are proteins in the cytosol modified
by chains of ubiquitin Steps: E1- binds ubiquitin molecule (uses ATP) E2- ubiquitin is transferred to E2 E3- transfer ubiquitin from E2 to the protein to be degraded
29
Polyubiquinated proteins are recognized by what
the proteosome