Prokaryotes (part 2) Flashcards
Parts of the Cell Envelope
Cell Wall
Cell Membrane
Functions of cell wall
Give shape and rigidity Contributes to pathogenicity Protection Site of action of antibiotics Used to differentiate bacteria
Cross-linking of cell wall
Transpeptidase
Prokaryotes Division
Gracilicutes
Firmicutes
Tenericutes
Mendosicutes
Thin cells walls, implying a gram negative type cell wall
Gracilicutes
Cyanobacteria
Thick and strong skin, indicating gram positive type cell wall
Firmicutes
Cyanobacteria
Pliable and soft nature, indicating the lack of a rigid cell wall
Tenericutes
Mycoplasmas
With unusual cell wall, lack conventional peptidoglycan
Mendosicutes
Archaea
A polymer of disaccharides linked by polypeptides found in the cell wall of bacteria
Peptidoglycan
Another name for peptidoglycan
Murein
Mucopeptide
Two molecules that make up the peptidoglycan
NAG and NAM
NAG
N-acetylglucosamine
NAM
N-acetylmuramic
Has a thick layer of peptidoglycan
Gram positive bacteria
Space between cell wall and cell membrane
Periplasmic space
Consist primarily of an alcohol and phosphate
Teichoic Acid
Function of the Teichoic Acid
Bind and regulate the movement of positive ions into and out of the cell
Two types of teichoic acid
Lipoteichoic acid
Wall teichoic acid
Spans the peptidoglycan layer
Linked to the plasma membrane
Lipoteichoic Acid
Linked to the peptidoglycan layer
Wall teichoic acid
Contains one or a very few layers of peptidoglycan and an outer membrane
Gram negative bacteria
Region between the outer membrane and the plasma membrane
Periplasm
Found in the periplasmic space in gram negative bacteria
Peptidoglycan
Gram positive characteristics
Thick PG
With TA
Without OM
Gram negative characteristics
Thin PG
Without TA
With OM
Outer membrane compositions
Lipopolysaccharides (LPS)
Lipoproteins
Phospholipids
Acts as an antigen
Distinguishes between species
Buried within the OM
LPS
Functions as endotoxin when cell dies
Responsible for the symptoms assoiciated with infections by G(-) bacteria
Lipid A
Importance of LPS
Imparts strong negative charge
Stabilization of membrane
Acts as endotoxin
Protective barrier
Gram stain mechanism
Crystal violet
Iodine
Alcohol
Safranin
Gram positive genera that show an increasing number of gram negative cells as the culture ages
Gram variable cells
Damage cell wall by hydrolyzing linkages between NAM and NAG residues
Lysozyme
Penicillin and its derivatives
Beta-lactam antibiotics
Cell with no cell wall
Protoplast
Cell with incomplete cell wall
Spheroplast
Wall-less bacteria
Contains sterols in plasma membrane
Mycoplasmas
Cell walls with high concentrations (60%) of mycolic acid
Acid-fast cell walls
Genus withh acid-fast cell walls
Mycobacterium
Prevents uptake of dyes
Mycolic acid
A stain that penetrates acid-fast bacterial cell wall most effectively when heated
Carbol fuchsin
Organism lacking or with atypical cell wall
Lack muramic acid and D-amino acids
Lack peptidoglycan
Archaea
Complex heteropolysaccharides
Pseudomurein
Highly organized, assymetric, flexible, and dynamic
Contains lipids and proteins
Cell membrane
Lacking in bacterial cell membrane
Sterols
Sterol-like molecules which stabilize the bacterial membrane
Hopanoids
Three types of proteins
Peripheral proteins
Integral proteins
Transmembrane proteins
Properties of peripheral proteins
Easily removed by mild treatment Found at inner or outer surface of membrane May function as enzymes Support Mediators of changes in shape
Properties of integral proteins
Can be removed from the membrane only after disrupting the lipid bilayer using detergents etc.
Properties of transmembrane proteins
Penetrate membrane completely
Could have channels which substance can enter and exit the cell
Function of the cell membrane
Separation of cell
Selectively permeable barrier
Detection and response to chemicals
Contains pigments and enzymes involved in photosynthesis in some bacteria
Chromatophores
In-foldings of the plasma membrane that extend to the cytoplasm
Chromatophores
In-foldings of the plasma membrane
Not true cell structures
Mesosomes
Extremely resistant to heat denaturation
Lipid monolayer membranes
Bacteria cell membrane characteristics
Lipid bilayer
Ester-linked lipids
Straight chain fatty acids
Archaea cell membrane characteristics
Lipid monolayer
Ether-linked lipids
Branched fatty acid
Intercellular structure
Cytoplasm Nucleoid Plasmid Ribosomes Inclusion bodies Endospores
Lacks unit membrane-bound organelles Largely water (80-90%)
Cytoplasm
Made up 60% of DNA, some RNA and protein
Nucleoid
Other names for nucleoid
Nuclear region
Chromatin body
Nuclear body
Circular DNA which carry genes which confer drag resistance, pathogenicity, new metabolic activities
Used for gene manipulation
Plasmid
Types of ribosomes
Matrix ribosomes
Plasma membrane ribosomes
Synthesis of proteins that will remain in the cell
Matrix ribosomes
Synthesis of proteins for transport outside the cell
Plasma membrane ribosomes
Inclusin bodies
Glycogen/starch Poly-beta-hydroxybutyric acid Cyanophycin Carboxysomes Gas vacuoles Magnetosomes (inorganic) Volutin (inorganic) Sulfur granules (inorganic)
Stored carbon and energy source
Glyogen/starch
Lipid-like, stored carbon and energy source
Poly-beta-hydroxybutyric acid
Stored nitrogen source
Polymer of amino acids
Cyanophycin
Contains enzymes involved in carbon fixation
Carboxysomes
Impermeable to water but permeable to gas
Provides buoyanct for aquatic bacteria
Gas vacuoles
Allows orientation for navigation towards nutrients
Not a storage product
Magnetosomes
Metachromatic granules
Polphosphate reservoir
Volutin
Energy and electron source
Sulfur granules
Also know as “resting cells”
Dormant in gram positive bacteria
Endospores
Made up of thick proteins around the outside membrane
Spore coat
Found in endospore
Dipicolinic acid (DPA) Calcium ions
Protects endospore DNA against damage
DPA
Transformation/Germination Steps in Endospores:
Activation
Germination
Outgrowth
Triggered by high heat
Germination
Small triggering molecules in germination
Germinants
Example of germinants
Alanine
Inosine
Nucletide