L28- Cf 2 Flashcards
How many are carriers for CFTR mutation
1 in 25
What does CFTR mean
Cf transmembrane conductance regulatory
What does 7q31.2 mean
CFTR is on chr 7, long P arm, at region 3, band 1 and subband 2
How long is it
189kb and 1480 aa
What % of mutations are missense (change in aa)
40%
What is the most common mutation and what class is it
Phe508 deletion which is a class 2 because it doesn’t get trafficked from er to the membrane due to incorrect folding
What % are the gly551asp mutation
3% (glycine change to aspartic acid)
What type of class is this
Class 3 because it gets trafficked to the membrane but reduced channel opening and gating activity
What is class 1 and what’s it caused by
No mrna or protein produced due to premature stop codon or splicing defects
What is class 2
Proteins not trafficked to membrnae
What is class 3 and 4
gating issues for class 3 and class 4 is issues / alteration in conductance
What are the rare class 5 and 6 mutations
Less CFTR protein is produced and class 6 is abnormally high turnover of CFTR on cell membrane
What secondary messenger activates the CFTR anion channel
Camp via pka phos activation of CFTR
What is CFTR gated by
Atp gated
What conductance does it usually cause
Cl conductance but can also be thiocyanate and hco
What are the 5 domains
2 membrane spinning domains (pore forming MSD)
2 nucleotide binding domains NBD(atp binding and hydrolysis)
1 regulatory R domain (what gets phos by pka)
What is atp and phosphorylation needed for (Shepard and Walsh 1999)
Needed for channel activation, gating activity channel opening or closing via hydrolysis
Which article discusses why phe508 doesn’t get trafficked to membrane
Scott- ward 2009
What recognises the mutation and targets it for proteasomes deg
Er quality control system erqc
What binds to the phe508 mutation and allows erqc recognition
Hsp70
Which domain does phe508 occur in same as gly551asp
Nbd1
How does the gly change to asp affect gating as a class 3 mutation
Occurs in one of the atp binding sites so atp can’t bind and affects gating activity (sheppard and Walsh 1999)
Which other channels other than enac does CFTR regulate
Cl channels eg ORCC, CaCC (outward rectifying)
K channels
Anion exchanger SLC26 family
Through what domain of CFTR do some have direct interaction
PDZ domain
Is CFTR expressed evenly on all epi cells
No. Expressed on ionocytes a lot more which is a therapeutic target
Which article talks about other channels and the asl homeostasis
Haq et Al 2015
Which 3 channels are important for asl homeostasis which are all modulated by CFTR
CaCC, slc26a, enac
What are the 2 layers of asl
Periciliary layer pcl which is kept water for cilia movement
Then gel-mucin made mucus on top