Early Earth and Prokaryote Flashcards

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1
Q

when was the Earth formed?

A

~4.5 bya

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2
Q

when was the earliest life form found?

A

~3.5 bya

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3
Q

what is the earliest life from known as?

A

LUCA - last universal common ancestor

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4
Q

what were the earliest fossils found? where?

A

prokaryotes found in sedimentary rocks called stromatolites

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5
Q

why did the layers in the rocks of stromatolites form?

A

the prokaryotes had slime layers/capsule and sediment would have stuck to them

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6
Q

when did the first photosynthetic prokaryotes originate? who were they?

A

~2.5 bya
cyanobacteria

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7
Q

what did photosynthetic prokaryotes do?

A

their waste product O2 created an aerobic environment

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8
Q

how long were prokaryotes the sole inhabitants of Earth for?

A

~2 billion years

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9
Q

what two groups can prokaryotes be split into?

A

Archaea and Bacteria

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10
Q

when did eukaryotes first arise? how?

A

~1.7 billion years ago
endosymbiosis - the coming together of prokaryotes

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11
Q

for nearly 90% of its existence, life on Earth has been confined to what environments?

A

H2O

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12
Q

what were the first land organisms?

A

plants in a mutualistic relationship with fungi living on the roots

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13
Q

what do most biologists agree that life evolved from?

A

evolved from inorganic materials that becomes ordered into the the molecules of life

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14
Q

what were these inorganic molecules able to do?

A

replicate and perform metabolism

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15
Q

early condition of the earth

A

lightning, volcanic activity, meteorite bombardment, acidic oceans, and high radiation were all more intense in the primordial universe

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16
Q

what do some scientist postulated that the primitive earth favored?

A

favored reactions that formed organic compounds from inorganic sources

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17
Q

why cant inorganic sources form organic compounds present day?

A

the atmosphere is rich in O2 and O2 affinity for electrons attacks chemical bonds

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18
Q

making organic compounds requires what? what provided this?

A

much energy probably provided by lightning and UV radiation because they early Earth lacked ozone (O3)

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19
Q

who created laboratory conditions comparable of those to primordial Earth?

A

Miller in conjunction with Urey

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20
Q

what did the primordial lab atmosphere consist of?

A

CH4, NH3, H2O, H2

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21
Q

what mimicked lighting in the lab?

A

sparks that were discharged in the synthetic atmosphere

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22
Q

what happened to the solution in the flask?

A

went from clear to murky brown as a variety of organic compounds, amino acids, and monomers had formed
“primordial soup”

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23
Q

what happened to the monomers in the flask? without the help of what?

A

come together to form polymers without the aid of enzymes, unlike monomers today

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24
Q

how did polymerization occur in early earth?

A

in vitro when monomers are dropped onto hot clay, sand, or hot rock
this process evaporates water and concentrates monomers that then form proteinoids

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25
Q

what are proteinoids?

A

polypeptides, primary level, made by abiotic means

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26
Q

why might’ve clay been important in polymerization?

A

monomers could bind to charged sits on clay particles
clay could’ve functioned as a lattice that brought monomers close together and then metal ions could function as catalysts joined them into polymers

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27
Q

what is an alternative to clay?

A

Fe pyrite - fool’s gold
that could’ve provided charged surface and electrons from this iron/sulfur compound to support bonding between monomers

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28
Q

what could have living cells have been preceded by?

A

protobionts - “early life”
droplets of macromolecules that maintain an internal environment separate from their surroundings

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29
Q

what properties of life do protobionts show?

A

metabolism and respond to a stimulus

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30
Q

what do protobionts produced in labs have

A

surrounded by a shell that is semipermeable and some form a phospholipid bilayer

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31
Q

what was the first genetic material?

A

RNA

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32
Q

what happened as protobionts droplet grew?

A

they split and split again and their molecules would become diluted if they could not replicate before division

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33
Q

if a metal atom is added as a catalyst, what happens to the RNA nucleotides made?

A

it goes from 5-10 to sequences up to 40 nucleotides long copied with less than 1% error in base-pair rules

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34
Q

what are the first proteins believed to be made from?

A

RNA alone

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35
Q

what would’ve the first proteins made been?

A

enzymes that aided in replication of RNA

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36
Q

since laboratory simulations cannot prove that life evolved this way, what is another idea?

A

life on Earth can from space
panspermia - idea that meteorites hitting early Earth brought organic compounds with them like monomers and cells

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37
Q

what is the debate for where life began?

A

most favor shallow water or moist sediments as the most likely sites for life’s origins
now some feel that life evolved in hydrothermal vents and early life lived off of sulfur compounds (H2S) and it would’ve protected the first life forms from the inhospitable surface of Earth

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38
Q

what effect does the change from 5 kingdom classification to 3 domain systems have?

A

it assigns more significance to the ancient evolutionary split between bacteria and archaea by using the super kingdom/domain

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39
Q

older word for bacteria

A

monera

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40
Q

where are prokaryote on earth?

A

almost everywhere on earth

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41
Q

how many prokaryotes are in a handful of soil?

A

more than the total number of people that have lived

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42
Q

what is the largest bacteria the size of?

A

a period

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43
Q

how much of prokaryotes are dangerous?

A

only a minority of prokaryotes cause diseases and a majority are essential to all life of Earth

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44
Q

how are prokaryotes essential?

A

some decompose dead organisms, returning essential nutrients to the soils which plants then use

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45
Q

how many prokaryote species are there?

A

an estimated ~4 million species on earth

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46
Q

what does archaea mean?

A

ancient

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47
Q

what type of environments did archaea inahbit?

A

extreme environments such as hydrothermal vents or geysers and volcanoes

48
Q

most prokaryotes are what type of cells?

A

unicellular

49
Q

three most common shapes of prokaryotes

A

coccus (spheres)
bacilus/bacilli (rods)
helical (spirilla and spirochetes)

50
Q

two coccus

A

diplococcus

51
Q

many coccus

A

streptococcus

52
Q

grape of coccus

A

staphylococcus

53
Q

what do the cell walls of prokaryotes prevent them from doing?

A

bursting in a hypotonic environment

54
Q

what can happen to prokaryotes in a hypertonic solutions?

A

plasmolyze and die

55
Q

where is peptidoglycan found?

A

only in the cell walls of bacteria and not archaea

56
Q

what two groups is bacteria separated by?

A

gram negative and gram positive

57
Q

what is peptidoglycan made of?

A

consists of sugars and polypeptides

58
Q

gram negative

A

rose color
cell wall is anchored between two membranes

59
Q

gram positive

A

purple
lost of peptidoglycan

60
Q

what bacteria is more disease causing why?

A

gram neg
toxic lipopolysaccharides
antibiotics have difficulty getting at the protected peptidoglycan layer of the cell wall

61
Q

are prokaryotes motile?

A

about half

62
Q

how do motile prokaryotes move?

A

use their flagella that rotates like a corkscrew allowing them to move in highly viscous environments like mucus in the throat

63
Q

three parts of a flagella

A

protein
hook
basal apparatus

64
Q

taxis

A

prokaryotes capable of moving toward or away from a stimulus

65
Q

how are some prokaryotes able to tell from up and down?

A

by magnetic particles in them that orient themselves towards Earth’s magnetic field which can help them find nutrient-rich sediment at the bottom of ponds

66
Q

what do prokaryotes lack?

A

nucleus and other membrane bound organelles

67
Q

nucleoid

A

single DNA strand that is formed into a circle

68
Q

plasmids

A

small circles of DNA that contain a few genes

69
Q

what do the plasmids often contain genes for?

A

antibiotic resistance and from the metabolism of unusual nutrients

70
Q

how are plasmids replicated?

A

separately from the nucleoid region and are readily transferred between prokaryotes during conjugation/horizontal transfer

71
Q

how is a prokaryotic ribosome different from a eukaryotic one? how is this important?

A

it is smaller;
some antibiotics bind to the ribosome of prokaryotes only and block protein synthesis

72
Q

what are the two ways antibiotics work?

A

on the cell wall and ribosomes

73
Q

what is the source of antibiotics from?

A

prokaryotes themselves who make them to compete with other prokaryotes, from some protists and fungi

74
Q

how do prokaryotes reproduce?

A

binary fission

75
Q

do prokaryotes perform mitosis or meiosis?

A

no

76
Q

how does genetic variation come about in prokaryotes?

A

mutations
transformation (gene taken up from environment)
transduction (genes transferred from a virus to a prokaryote)
conjugation ( genes from one prokaryote to another prokaryote)

77
Q

how is gene movement like in prokaryote?

A

unilateral

78
Q

what does cooling and refrigerating do to food?

A

slow spoilage/prokaryote growth

79
Q

how is uncontrollable colony growth kept in check?

A

by the depletion of some nutrient or accumulation of wastes that poison the colony

80
Q

endospores

A

heat-resistant/durable structures

81
Q

when do prokaryotes form endospores? why?

A

when it is exposed to a trauma like lack of nutrients or water or extreme heat or cold to avoid death

82
Q

how to kill endopores?

A

autoclaves

83
Q

how to make endospores reporduce?

A

place them in a hospitable environment where they can rehydrate

84
Q

energy source of photo-autotrophs. ex?

A

light
plants, algae, cyanobacteria

85
Q

energy source of chemo-autotrophs. ex?

A

inorganic chemicals
bacteria near deep sea vents life of H2S

86
Q

energy source of photo-heterotrophs. ex?

A

light and organic compounds
venus fly trap

87
Q

energy source of chemo-heterotrophs. ex?

A

organic compounds
humans

88
Q

what are majority of prokaryotes?ex,

A

chemo-heterotrophs
saprobes

89
Q

what are saprobes

A

microorganisms that live off dead organic matter and parasite that live off a live host’s body fluids

90
Q

what are some some prokaryotes able to do with the nitrogen cycle?

A

nitrogen fixation - N2 gas into NH3 ammonia

91
Q

what do prokaryotes living in the soil with ammonia?

A

convert it into nitrite NO-2 and nitrate NO-3

92
Q

obligate aerobes

A

use oxygen for cellular respiration and cannot grow without it

93
Q

faculatative anaerobes

A

use oxygen if present, but can also grow by fermentation

94
Q

obligate anaerobes

A

poisoned by oxygen

95
Q

what were the earliest cells on earth?

A

chemo-autotrophs that obtained their energy from inorganic chemicals like H2S and Fe+2
FeS2 + H2S –> FeS2 + H2 + free energy

96
Q

how were the chemoautotrophs?

A

opportunistic as well obtaining some nutrients by absorbing organic compounds when available

97
Q

first photosynthetic prokaryotes that made O2

A

cyanobacteria

98
Q

another word for cyanobacteria

A

blue-green algae (prokaryote)

99
Q

how did cyanobacteria change the world?

A

releasing O2 as a by-product

100
Q

when did cyanobacteria evolve?

A

2.5-3 bya

101
Q

cyanobacteria were able to perform photosynthesis without? what did they have instead?

A

the aid of chloroplast structures;
infoldings of the plasma membrane where bacteriochlorophyll is located

102
Q

how do purple and green sulfur bacteria photosynthesize?

A

H2S–> no O2

103
Q

how do cyanobacteria photosynthesize?

A

use H2O and make O2

104
Q

how much in common do archaea have with bacteria?

A

as much as they do with eukarya

105
Q

3 main groups of archaea

A

methanogens
halophiles
thermophiles

106
Q

what do methanogens do?

A

produce CH4 and are among the strictest of obligate anaerobes

107
Q

where do methanogens live?

A

in swamps and marshes and are often used in sewage treatment to break down waste in septic tanks
in the guts of many ruminants and some people

108
Q

where do extreme halophiles live?

A

salty environments like the Dead Sea, San Francisco Bay where commercial salt is made because their presence in their ponds turn them reddish/yellow or purple and are harmless

109
Q

where do extreme thermophiles live?

A

hot sulfur springs of Yellowstone National Park and in hot hydrothermal vents beneath the ocean floor that can be 105 C/221 F

110
Q

what account for most prokaryotes? how many groups are there? examples?

A

Bacteria
12
cyanobacteria, gram positive and negative

111
Q

what do prokaryotes decompose?

A

recycle essential elements like CHON and SPONCH back into ecosystems then these elements are available for other organisms

112
Q

what were Koch’s postulates based upon?

A

linking diseases to specific bacteria

113
Q

what 4 criteria did Koch use?

A
  1. find the pathogen in a diseased animal
  2. grow the pathogen on agar and ID it with a microscope
  3. infect a healthy animal with the pathogen
  4. grow the pathogen again on agar from the dead animal and ID it with a microscope
114
Q

of the pathogenic/disease causing prokaryotes, what are exotoxins?

A

secrete toxins
botulism

115
Q

of the pathogenic/disease causing prokaryotes, what are endotoxins?

A

toxins in their cell membrane
gram - have lipopolysaccharides

116
Q

where can botulism grow and what can it do?

A

grow in canned food
one gram is enough to kill 10^6 people