Ch 6 - Molecular Biology of Bacteria Flashcards
DNA is duplicated
replication
information from DNA is transferred to RNA
transcription
encodes polypeptides
mRNA
plays role in protein synthesis
tRNA, rRNA
information in RNA is used to build polypeptides
translation
Central dogma of molecular biology
DNA –> RNA –> protein
Backbone of DNA chain is:
alternating phosphates and the pentose sugar deoxyribose
Adenine always pairs with:
Thymine
Guanine always pairs with
Cytosine
_______ ________ between DNA strands hold two strands together
Hydrogen bonds
A–T pair has ____ hydrogen bonds
two
G–C pair has _____ hydrogen bonds
three
High heat breaks hydrogen bonds, causing ________.
denaturation
double helix is underwound
negative supercoiling
double helix is overwound
positive supercoiling
_______supercoiling is predominantly found in nature
negative
Size of DNA molecule is expressed in ______ ________.
base pairs
____ base pairs make up 1 turn of the helix
10
entire complement of genes in cell or virus
genome
main genetic element in prokaryotes
chromosome
Average protein contains _____ amino acids
~300
majority of plasmids are ______-stranded
double
most plasmids are circular/linear?
circular
confer resistance to antibiotics and other growth inhibitors
r-plasmids (resistance plasmids)
these plasmids Enable pathogen to colonize or can cause host damage.
virulence plasmids
Transcription is carried out by ________.
RNA polymerase
RNA polymerase recognizes DNA sites called _______.
promoters
Transcription stops at specific sites called _____ ________.
transcription terminators
Two regions within promoters that are highly conserved
-10 region, -35 region
transcription is terminated without any additional factors
intrinsic terminators
Rho protein recognizes specific DNA sequences and causes a pause in the RNA polymerase
rho dependent termination
An mRNA encoding a group of co-transcribed genes is called:
polycistronic mRNA
a group of related genes cotranscribed on a polycistronic mRNA
operon
Allows for expression of multiple genes to be coordinated
operon
the synthesis of proteins from RNA
translation
a triplet of nucleic acid bases (codon) encodes a single amino acid
genetic code
multiple codons encode a single amino acid
degenerate code
________ on tRNA recognizes codon
Anticodon
irregular base pairing allowed at third position of tRNA
wobble
terminate translation (UAA, UAG, and UGA)
stop codons
translation begins with AUG
start codon
triplet code requires translation to begin at the correct nucleotide
reading frame
ensures proper reading frame
Shine–Dalgarno sequence
AUG followed by a number of codons and a stop codon in the same reading frame
open reading frame (ORF)
multiple codons for the same amino acid are not used equally
codon bias
______ is required to attach amino acid to tRNA
ATP
______ is cloverleaf in shape
tRNA
sites of protein synthesis
ribosomes
Interactions of the R groups force the molecule to twist and fold in a certain way
secondary structure
3-dimensional shape of polypeptide
tertiary structure
Number and types of polypeptides that make a protein
quarternary structure
When proteins are exposed to extremes of heat, pH, or certain chemicals
denaturation
found on proteins requiring transport from cell
signal sequences
assist in folding improperly folded proteins
chaperonins