Biochemistry/Nutrition Flashcards
What is vitamin B1? What is the main molecule where vitamin B1 is found?
thiamine
thiamine pyrophosphate
What is vitamin B2? What are the main two molecules that vitamin B2 is found?
riboflavin
FAD and FMN
What is vitamin B5? What is the main molecule where vitamin B5 is found?
pantothenic acid
co-enzyme A
What is vitamin B6? What is the main molecule where vitamin B6 is found? What type of enzymatic rxn is B6 involved in?
pyridoxal phosphate
PLP
aminotransferase
What is vitamin B7?
biotin
What is vitamin B9?
folate
What is vitamin B12?
cobalamin
What is another name for vitamin A?
retinol
What vitamin is necessary for differentiation of epithelial tissues?
vitamin A
Deficiency of what vitamin can cause corneal degeneration?
vitamin A
What type of enzyme is vitamin B1 needed for?
dehydrogenase
What are four dehydrogenases vitamin B1 is necessary for?
- α-ketoglutarate dehydrogenase
- transketolase
- PDH
- branched-chain ketoacid dehydrogenase
Wernicke-Korsakoff affects what two structures in the brain?
Mamilary bodies
Medial Dorsal Nucleus of Thalamus
B1 deficiency impairs the breakdown of what metabolic product?
glucose
What two tissues are affected first by Wernicke-Korsakoff Syndrome?
brain and heart
How are WK and Beriberi diagnosed?
increased transketolase activity of RBCs after B1 infusion
What are two signs of vitamin B2 deficiency?
Cheliosis and Corneal vascularization
What type of reaction is B2 used in?
redox
What B vitamin is derived from tryptophan?
niacin
The synthesis of niacin requires what two B vitamins?
B2 and B6
What B vitamin can be used to treat dyslipidemia? What is raised and lowered?
B3
VLDL = lowered
HDL = raised
What amino acid is not absorbed in Hartnup disease? What B vitamin is administered to relieve the effects?
tryptophan
Niacin
Deficiency of what two products can lead to pellagra?
Niacin or Tryptophan
Malignant carcinoid consumes what amino acid in excess?
Tryptophan
A carcinoid tumor is derived from what type of cell? Where do most carcinoid tumors arise?
neuroendocrine
midgut
What neurotransmitter do carcinoid tumors release? What amino acid is this neurotransmitter derived from?
serotonin
serotonin derived from Trp
Deficiency of what vitamin can lead to adrenal insufficiency?
B5
What three type of reactions is vitamin B6 used for?
transamination
decarboxylation
glycogen phosphorylase
Name a common food with a large supply of avidin? What B vitamin can this cause a decrease i?
raw egg whites
B7 (biotin)
Biotin is necessary for what type of reactions?
carboxylation
What is the primary symptom of folate deficiency?
macrocytic, megaloblastic anemia
What amino acid metabolism rxn are folate/B12 necessary for?
homocysteine to methionine
What three drugs can cause B9 deficiency?
phenytoin, methotrexate, sulfonamides
In a vitamin B9 deficiency, are methylmalonic acid levels normal?
yes
In a vitamin B12 deficiency, are methylmalonic acid levels normal?
higher
Other than homocysteine to cysteine, what other rxn is B12 required for?
methylmalonyl-CoA to succinyl-CoA
Deficiency of what B vitamin can cause subacute combined syndrome?
B12
What three tracts are destroyed durig subacute combined syndrome?
DCML
lateral corticospinal
spinocerebellar
What helminth can cause B12 deficiency? What is another name for this helminth?
Diphyllobothrium latum
fish tapeworm
What enzyme of adrenergic synthesis is dependent on Vitamin C?
dopamine β-hydroxylase
What are the two names for vitamin D absorbed from milk?
vitamin D3
cholecalciferol
In what layer of the epidermis does vitamin D conversion take place?
stratum basale
What is the storage form of D3?
25OH-D3
What is the active form of D3? What is another name for this?
1,25OH-D3
calcitriol
What type of cell can aberrantly activate D3? When is this seen?
epitheliod macrophage/histiocyte
sarcoidosis/granuloma
What is an acanthocyte?
spiked erythrocyte
What vitamin protects RBCs from free-radical damage?
Vitamin E
A decrease of what vitamin may present similar neurological symptoms to B12 deficiency but without what other three symptoms?
- megaloblastic anemia
- hypersegmented neutrophils
- no increase in methyl-malonic acid
What vitamin can act as an anticoagulant?
Vitamin E
Other than II, VII, IX and X, what clotting factors are dependent on vitamin K?
Protein C and Protein S
What enzyme that processes alcohol is located in the cytosol?
alcohol dehydrogenase
What enzyme that processes alcohol is located in the mitochondria? What is the product of this enzyme?
acetylaldehyde dehydrogenase
acetate
What is the limiting reagent for alcohol metabolism?
NAD+
What molecule does FA synthesis begin with?
glycerol-3-phosphate
During heavy alcohol consumption, what does OAA get converted into? What does this prevent?
malate
gluconeogenesis
During heavy alcohol consumption, what does pyruvate get converted into? What is the result of this?
lactic acid
lactic acidosis
During heavy alcohol consumption, what does glyceraldehyde-3-phosphate get converted into? What is the result of this?
glycerol-3-phosphate
fatty acid synthesis
During excess alcohol consumption, why does ketogenesis take place?
acetyl-CoA is shunted into ketogenic pathways rather than TCA
What drug inhibits alcohol dehydrogenase?
Fomepizole
What drug inhibits acetylaldehyde dehydrogenase?
Disulfarim
Why does a child with Kwashiorkor develop fatty liver?
decrease apolipoprotein synthesis
What is marasmus?
muscle wasting
Where in the cell does β-oxidation occur?
mitochondria
Where in the cell does glycolysis occur?
cytosol
Where in the cell does fatty acid synthesis occur?
cytosol
Where in the cell does acetyl-CoA synthesis occur?
mitochondria
Where in the cell does the TCA occur?
mitochondria
Where in the cell does oxidative phosphorylation occur?
mitochondria
Where does HMP Shunt (PPP) occur in cells?
cytosol
What is the acronym to remember which metabolic processes occur in both the mitochondria and cytosol? What are they?
HUG
Heme synthesis, Urea cycle and Gluconeogenesis
What is the rate limiting enzyme of glycolysis? What is the product?
PFK1
F16bP
What molecule activates PFK1?
F26bP
What two compounds inhibit PFK1?
ATP and citrate
What is the rate limiting enzyme of GNG? What is the product?
F16bPase
F6P
What are the two activators of F16bPase?
ATP and acetyl-CoA
What are the two negative regulators of F16bPase?
AMP and F26bP
What is the rate limiting enzyme of the TCA cycle? What is the main activator?
isocitrate dehydrogenase
AMP
What is the rate limiting enzyme of glycogenesis? What are the two hormone activators of glycogenesis?
glycogen synthase
insulin and cortisol
What are the two negative hormone regulators of glycogenesis?
epinephrine and glucagon
What is the rate limiting enzyme of glycogenolysis? What are the two hormone activators of glycogen phosphorylase?
glycogen phosphorylase
epinephrine and glucagon
What is the negative hormone regulator of glycogenolysis?
insulin
What is the main enzyme of the HMP Shunt (PPP)?
G6PD
What is the main positive regulator of HMP Shunt (PPP) pathway?
positive = NADP+
negative = NADPH
What is the rate limiting enzyme of pyrimidine synthesis?
carbamoyl phosphate synthetase II
What two organs are involved in the malate aspartate shutle?
heart and liver
What does CoA carry?
acyl groups
What does biotin carry?
CO2
What does THF carry?
one-carbon groups
What does SAM carry?
methyl group
What does TPP carry?
aldehydes
Is NAD+ used in catabolic or anabolic processes?
catabolic
Is NADP+ used in catabolic or anabolic processes?
anabolic
What reducing equivalent is used in the respiratory burst?
NADPH
What reducing equivalent is used in the cytochrome p450 system?
NADPH
Which has higher affinity, glucokinase or hexokinase?
hexokinase
What two locations is hexokinase not located?
liver and β-cells of pancreas
Where is glucokinase located?
liver and β-cells of pancreas
Which has a higher Vmax, hexokinase or glucokinase?
glucokinase
Is hexokinase or glucokinase induced by insulin?
glucokinase
Which is feedback inhibited by G6P, hexokinase or glucokinase?
hexokinase
Is glucokinase or kexokinase associated with MODY?
glucokinase
How many pyruvate molecules are produced per glucose during glycolysis?
two
How many ATP molecules are produced per glucose during glycolysis?
two
How many NADH molecules are produced per glucose during glycolysis?
two
What are the two enzymes of glycolysis that produce ATP?
pyruvate kinase and phosphoglycerate kinase
Does glucagon increase or decrease cAMP/PKA?
increases
Does insulin increase or decrease cAMP/PKA?
decrease
Do cAMP/PKA activate or inhibit PFKII?
inhibit
Does F26bP inhibit or activate PFK1? Does this lead to an increase in glycolysis or GNG?
activate
glycolysis
Does F26bP inhibit or activate Fructose bisPhosphatase? Does this lead to an increase in glycolysis or GNG?
inhibit
GNG
What are the two energy equivalents produced by the PDH complex?
Acetyl-CoA and NADH
PDH is similar to what other complex? What is the product of this pathway?
α-ketoglutarate dehydrogenase
succinyl-CoA
What co-factor of the PDH does arsenic inhibit? What are the three symptoms?
Lipoic acid
vomiting, rice-water stools, garlic breath
What are the five co-factors of the PDH?
- Pyrophosphate (thiamine, B1)
- FAD
- NAD
- CoA (B5, pantothenic acid)
- Lipoic acid
If the PDH is non-functional, what two molecules does pyruvate get shunted into? What enzymes?
lactate (via LDH)
alanine (ALT)
What is the dietary modification for PDH Deficiency?
ketogenic diet
What is Cori cycle? What is produced? Where? What molecule gets transported?
glucose
liver
lactate
Does fermentation produce NAD+ or NADH?
NAD+
What rxn does pyruvate carboxylase catalyze? What B vitamin is involved?
pyruvate into OAA
biotin
What reducing equivalent does the malate-aspartate shuttle bring into the mitochondria?
NADH
What reducing equivalent does the glycerol-3-phosphate shuttle bring into the mitochondria?
FADH2
What is complex I of the ETC? What drug inhibits complex I?
NADH Dehydrogenase
Rotenone
What is complex II of the ETC? What reducing equivalet gets oxidized?
Succinate Dehydrogenase
FADH2
What is another name for complex III? What drug inhibits complex III?
Cyt-C Reductase
Antimycin A
What is another name for complex IV? What drug inhibits complex IV?
Cyt-C Oxidase
CO and Cyanide
What drug inhibits complex V?
Oligomycin
Other than 2,4-DNP, what other drug can cause electron uncoupling of the ETC?
aspirin
What is the mnenomic to remember the regulated steps of GNG?
Pathway Produces Fresh Glucose
What are the four regulated enzymes of GNG?
- Pyruvate carboxylase
- PEPCK
- F16bPase
- G6Pase
What rxn is catalyzed by PEPCK? WHat is used as energy to drive this reaction?
OAA to PEP
GTP
What two metabolic pathways are generated to produce NAD+ when a patient is consuming alcohol?
pyruvate to lactate
OAA to Malate
Odd chain fatty acids enter metabolism via what molecule? Odd chain fatty acids can enter the TCA via what molecule?
propionyl-CoA
succinyl-CoA
Can acetyl-CoA enter GNG pathways?
no
What are the two products of G6P Dehydrogenase?
ribulose-5-phosphate
NADPH
What vitamin cofactor do transketolases require?
B1
What are the three products of the non-oxidative phase of the HMP shunt?
G3P
F6P
ribose-5-phosphate
The respiratory burst requires what enzyme? What disease presents in the absence of this disease?
NADPH oxidase
chronic granulomatous disease
NADPH oxidase catalyzes what reaction in the respiratory burst?
O2 to superoxide
What rxn is catalyzed by superoxide dismutase?
superoxide to hydrogen peroxide
What is the substrate for myeloperoxidase? What is the product of myeloperoxidase?
H2O2
HOCl
Glutathione peroxidase destroys what molecule? What cofactor is required?
H2O2
selenium
Glutathione reductase catalyzes what rxn? What molecule is used as a source of energy for this reaction? What co-factor is required?
GSSG to GSH
NADPH
selenium
Which bacteria are patients with CGD at an increased risk for acquiring? Which fungus are patients with CGD at an increased risk for acquiring?
S. aureus
Aspergillus
Which bacteria possess pyocyanin? What is produced?
P. aeruginosa
ROS
What two locations is lactoferrin found?
secretory fluids and neutrophils
What is the sugar byproduct of G6P dehydrogenase?
6-phosphogluconate
In what cell type are Heinz bodies found? What are Heinz bodies composed of?
RBCs
oxidized hemoglobin
What is removed from ‘Bite Cells’?
Heinz bodies
In what two locations does fructose appear in Essential Fructosuria? What enzyme is absent? What is the mode of inheritance for fructosuria?
blood and urine
Fructokinase
autosomal recessive
What enzyme is absent in Fructose Intolerance? What product accumulates?
Aldolase B
Fructose-1-Phosphate
What are the two products of normal Aldolase B functioning?
Glyceraldehyde
DHAP
What enzyme converts glyceraldehyde into GA3P?
Triose Kinase
What two metabolic pathways are inhibited during Fructose Intolerance?
Glycogenolysis and Gluconeogenesis
What two sugars make up sucrose? Comsumption of of can lead to the symptoms of Fructose Intolerance?
glucose and fructose
fruit/juice/honey
What rxn does galactokinase catalyze?
galactose to galactose-1-phosphate
What product accumulates in Galactokinase Deficiency?
galactitol
What is the mode of inheritance of galactokinase deficiency?
autosomal recessive
How does Galactokinase Deficiency present in infants?
infantile cataracts
What enzyme is absent in Galactosemia?
Galactose-1-Uridyltransferase
What rxn does Galactose-1-Uridyltransferase catalyze?
galactose-1-phosphate to glucose-1-phosphate
What is the mode of inheritance of Galactosemia?
autosomal recessive
What toxic product accumulates during Galactosemia?
galactitol
Where does galactitol accumulate in the body during Galactosemia?
lens of eye
What two sugars compose lactose?
glucose and galactose
What is the mnenomic to remember the enzymes involved with fructose intolerance and galactosemia?
FAB GUT
E. coli sepsis in neonates can be indicative of what disease?
Galactosemia