34) Breeding value: definitions, methods of estimation (BLUP, AM, gBV) Flashcards

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1
Q

List the definitions of breeding value

A
  • Genetic merit
  • Breeding value
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2
Q

Genetic merit: Types

A

(Absolute/theoretical value)

Individual, population

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3
Q

Breeding value: Types

A

(Relative/theoretical value)

Individual, population, general, special, aggregated

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4
Q

Genetic merit: Definition

A
  • Sum of calculated averages
  • According to additive + non-additive allelic effects in each loci
  • An individual’s genetic merit is theoretical and remains constant
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5
Q

Breeding value: Definition

A

Deviation of:

  • Individual genetic merit from
  • Population genetic merit
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6
Q

Breeding value: General value

A

Only additive gene effects are considered

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7
Q

Breeding value: Special value

A

Calculation including:

  • Additive gene effects
  • Nonadditive gene effects
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8
Q

Breeding value: Aggregated value

A

Complex calculation:

  • For more traits simultaneously
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9
Q

List the methods of breeding value estimation

A
  • BV
  • BLUP
  • AM
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10
Q

BV

A
  • Breeding value
  • The difference between individual and population GM
  • Estimated from phenotypic performance
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11
Q

Goal of breeding

A
  • Select the best animal for breeding
  • Genetically superior to others
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12
Q

EBV=

Estimated breeding value

A

h2 x (pi - ppop)

  • h2 = Heritability estimate*
  • pi = Individual phenotypic performance*
  • ppop= Mean of population’s phenotypic performance*
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13
Q

Grades of multistage BV estimation

A
  • Ancestral performance
  • Collateral performance
  • Own performance
  • Progeny performance
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14
Q

BLUP

A
  • Best linear unbiased prediction
  • A complex system of equations used in BV estimation
  • General linear mixed model
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15
Q

General linear mixed model equation

A

y = Xβ + Zu + e

  • y = Observation vector*
  • β​ = Unknown vector*
  • u = Non-observed random vector*
  • RXZ = Known matrices describing random effects*
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16
Q

AM

A
  • Animal model
  • Most developed form of the BLUP method
  • When more or less pedigree information is available
  • Phenotypic performance is adjusted according to degree of relationship
17
Q

Model types used in BV estimations

A
  • Additive
  • Nonadditive
18
Q

Additive models

A
  • AM
  • BLUP
  • Correlation factors
  • Classification models
19
Q

Nonadditive models

A
  • Dominance-epistasis
  • Cytoplasmic inheritance
  • Major genes
20
Q

gBV

A

Genomic breeding value