1D: Principles of Bioenergetics & Fuel Molecule Metabolism Flashcards
Endothermic Reactions
Require energy, nonspontaneous, positive heat flow (absorbed = feels cold), increase enthalpy, breaking chemical bonds
Exothermic Reactions
Release energy, can be spontaneous, high entropy, negative heat flow (lost = feels hot), decrease enthalpy, form chemical bonds
Free Energy Equation
dG = dH - TdS
Standard Free Energy Equation
dG = -RTlnK
dG less than 1
K>1, favors products, spontaneous
dG equal to 0
K=1, at equilibrium
dG greater than 1
K
Nonspontaneous Reaction Criteria
\+G = +H, -S \+G = +H, +S (low temp) \+G = -H, -S (high temp)
Spontaneous Reaction Criteria
- G = +H, +S (high temp)
- G = -H, +S
- G = -H, -S (low temp)
Spontaneous Reaction Criteria
- G = +H, +S (high temp)
- G = -H, +S
- G = -H, -S (low temp)
ATP Hydrolysis
ATP + H2O -> ADP + Pi
Exergonic (dG
ATP Group Transfer
When ATP is depleted during exercise, phosphate is transferred from phosphocreatine to ADP to replenish ATP
Oxidation Half Reaction
Loses electrons (uses solid)
Reduction Half Reaction
Gains electrons (produces solid)
Soluble Electron Carriers
Electrons transferred from one electron carrier to another; energy level decreases; energy is released
Ubiquinone (Q)
Lipid-soluble electron carrier; reduced to ubiquinol
Cytochrome c
Water-soluble electron carrier; contains Fe pigment
Quinone
Lipid-soluble carrier that shuttles electrons between large macromolecular complexes embedded in the membrane
Quinone
Lipid-soluble carrier that shuttles electrons between large macromolecular complexes embedded in the membrane
Flavoproteins
Derivatives of riboflavin; FAD and FMN; involves in bioluminescence, photosynthesis, DNA repair, apoptosis
Electron Transfer Flavoprotein
Function as a specific electron acceptor for primary dehydrogenases
Carbohydrate Formula
(CH2O)n; deoxy = hydrogen replacing -OH
Aldose
Sugar with an aldehyde group
Ketose
Sugar with a ketone group
Pyranose
Hexagonal ring
Furanose
Pentagonal ring
Common Sugars
Glucose, Galactose, Fructose
Absolute Configuration
D/L = based on chirality of the carbon atom furthest from the carbonyl group
Alpha/Beta = anomeric configuration
Alpha Anomer
Oxygens are cis to each other
Beta Anomer
Oxygens are trans to each other
Beta Anomer
Oxygens are trans to each other
Epimers
Diastereomers; different configuration at one of the chiral carbons
Anomers
Stereoisomers; different configuration at the same carbon
Hydrolysis of Glycoside Linkage
Done by enzymes (amylase = starch, glycosylase = nucleotide)
Hydrolysis of Glycoside Linkage
Done by enzymes (amylase = starch, glycosylase = nucleotide)
Monosaccharides
Colorless, water-soluble, crystalline solid
Mutarotation
Equilibrium between the alpha and beta anomer
Disaccharides
Simple polysaccharides, made via condensation reaction between two monosaccharides
Maltose
Glucose + Glucose (1->4 Linkage)
Sucrose
Glucose + Fructose (1->2 Linkage)
Lactose
Galactose + Glucose (1->4 Linkage)
Lactose
Galactose + Glucose (1->4 Linkage)
Polysaccharides
Long chains of repeating monosaccharide units connected by glycosidic links; Storage or Structural
Storage Polysaccharides
Starch and Glycogen
Structural Polysaccharides
Chitin and Cellulose
Starch
B 1->4 linkages
Cellulose
A 1->4 linkages
Cellulose
A 1->4 linkages
Glycolysis
Conversion of Glucose into 2 molecules of Pyruvate; produces 4 ATP molecules and 2 NADH; occurs in cytosol
Glycolysis Net Products
2 NADH 2 ATP
Glycolysis Enzymes
- Hexokinase
- Phosphoglucoisomerase
- PFK
- Aldolase
- GAP Dehydrogenase
- Phosphoglycerate Kinase
- Phosphoglycerate Mutase
- Enolase
- Pyruvate Kinase
Hexokinase
Glucose -> G6P
-ATP
Phosphoglucoisomerase
G6P -> F6P
PFK
F6P -> F1,6BP
-ATP
Aldolase
F1,6BP -> GAP or G3P
GAP Dehydrogenase (x2)
GAP -> 1,3BPG
-Pi
+NADH
Phosphoglycerate Kinase (x2)
1,3BPG -> 3PG
+ATP
Phosphoglycerate Mutase (x2)
3PG -> 2PG
Enolase (x2)
2PG -> PEP
+H2O
Pyruvate Kinase (x2)
PEP -> Pyruvate
+ATP
Glycolytic Feeder Pathways
Glycogenolysis, Starch Metabolism
-contribute glucose to the pathway
Fermentation
Anaerobic Glycolysis; converts sugars to acids, gases or alcohol; occurs in bacteria, yeast and o2 starved muscle cells
Fermentation
Anaerobic Glycolysis; converts sugars to acids, gases or alcohol; occurs in bacteria, yeast and O2 starved muscle cells; regenerates NAD to keep glycolysis going
Fermentation
Anaerobic Glycolysis; converts sugars to acids, gases or alcohol; occurs in bacteria, yeast and O2 starved muscle cells; regenerates NAD to keep glycolysis going
Fermentation Chemistry
Redox reaction, reduces pyruvate to oxidize NADH into NAD; 1 NAD per Pyruvate
Alcoholic Fermentation
Pyruvate reduced to Ethanol
Lactic Acid Fermentation
Pyruvate reduced to Lactate
Gluconeogenesis
Synthesis of Glucose from non-carbohydrate sources (pyruvate, lactate, glycerol); occurs in the liver
Gluconeogenesis Unique Enzymes
Pyruvate Carboxylase
PEP Carboxykinase
G6Pase
Pyruvate Carboxylase
Pyruvate -> Oxaloacetate
+HCO3
-ATP
PEP Carboxykinase
OAA -> PEP
-GTP + CO2
G6Pase
G6P -> Glucose
+H2O
-Pi
G6Pase
G6P -> Glucose
+H2O
-Pi
F1,6BP
Activates PFK,
high levels = glycolysis
low levels = gluconeogenesis
PPP Oxidative Phase
Generates NADPH
PPP Non-oxidative Phase
Generates 5C Sugar (Ribose-5-Phosphate)
PPP Non-oxidative Phase
Generates 5C Sugar (Ribose-5-Phosphate)
Net Products of Respiration
36 ATP
Net Products of Respiration
36 ATP
Regulation of Metabolic Pathways
Done through feedback inhibition, isozymes, enzymes concentrations, rapid effect or slow effects
Isozymes
Different enzymes that catalyze the same reaction
Regulation of Glycolysis
Irreversible steps: Hexokinase, PFK, Pyruvate Kinase
F2,6BP, AMP
F2,6BP
Potent Activator of PFK-1, synthesized when blood sugar is low and glucagon elevates cAMP
PEPCK Inhibitors
ADP
F1,6BP
Activates PFK,
high levels = glycolysis
low levels = gluconeogenesis
Glycogenolysis [Muscle]
Provides G6P for Glycolysis; Muscle lacks G6Pase
Glycogenolysis [Liver]
Creates free glucose to be released into the bloodstream for cellular uptake
Glycogenolysis Enzymes
Glycogen Phosphorylase
Phosphoglucomutase
Glycogen Debranching Enzyme
FBPase Activators
Citrate
Glycogenesis Enzymes
Hexokinase Phosphoglucomutase UDP-Glucose Phosphorylase Glycogenin Glycogen Synthase
Pyruvate Kinase Activators
F1,6BP
Glycogenin
Acts as a primer, converting glucose to glycogen; it is a glycosyltransferase
Pyruvate Carboxylase Activators
Acetyl CoA
Pyruvate Carboxylase Inhibitors
ADP
Protein Kinase A
Activated by epinephrine through adenylate cyclase activity; activated by calcium ions + cAMP
Inhibits Glycogen Synthase
Insulin
Stimulates glycolysis, glycogenesis, protein anabolism, lipogenesis
Glycogenolysis [Muscle]
Provides G6P for Glycolysis; Muscle lacks G6Pase
GLUT2
Transports dephosphorylated glucose into the bloodstream
Metabolic Control Analysis
Examines how the control of influx and concentrations of metabolites in a metabolic pathway distributed between different enzymes
Acetyl-CoA Production
Produced via Pyruvate Dehydrogenase Complex and Pyruvate Formate Lyase