The Calvin Cycle Flashcards

1
Q

Calvin cycle involves

A

11 enzyme catalyst reactions that use NADPH to reduce CO2 to glucose through 3 turns. Endergonic

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2
Q

Calvin cycle reaction

A

1 CO2—1C6H12O6

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3
Q

After 3 turns

A

A G3P molecule is produced. 2 of these are needed to make one glucose

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4
Q

3 phases

A

They each happen during every turn. Fixation, reduction, and regeneration

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5
Q

Fixation

A

A carbon from CO2 is fixed to ribulose 1,5 biphosphate (RuBP) to produce 2 3 carbon 3 phosphoglycerate

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6
Q

Reduction

A

3-Phosphate glyceride gets a p from ATP becoming ADP producing 1, 3 Biphosphate glyceride. Sodium electrons from NADPH reduces them to G3P

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7
Q

Regeneration

A

A multistep process where 5 carbons rearrange to from RuBP

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8
Q

In 3 turns

A

3 CO2 + 3 RuBP— 6 3phosphoglyerides using 6 ATP.

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9
Q

Next step in 3 turns

A

6NADPH + 1, 3 phosphoglycerate— 6G3P molecules. Using ATP 5 G3P are turned into 3 RuBP

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10
Q

Overall

A

One extra G3P is produced and 9 ATP and 6 NADPH were used

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11
Q

Monosaccharides next steps

A

Becomes a disaccharide like sucrose or a polysaccharide like starch or cellulose , or consume G3P and change

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12
Q

Things G3P can become

A

Amino acids, fatty acids, lipids in the cytoplasm or cytosol

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13
Q

Sucrose

A

Glucose linked to fructose. Most common product to circulate from cell to cell. Stores organic molecules

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14
Q

RuBP

A

Most common protein on earth making up 50% of plant protein. Catalyzes the fixation of CO2.

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15
Q

Rubisco

A

A very slow enzyme

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16
Q

Rubisco shape

A

Cube with 8 small and 8 large sub units

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17
Q

Large subunits

A

Active site with defined bonding sites for CO2 and RuBP

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18
Q

Small subunit

A

Regulatory by not a catalyst

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19
Q

Rubisco synthesis

A

Uses genes from 2 different genomes. Large subunit encoded in the chloroplast and the small encoded in the cytosol, and then imported to the chloroplast for unification

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20
Q

Why is rubisco slow?

A

It is not only an enzyme for CO2, but also photo respiration

21
Q

Photorespiration

A

Oxygen bonds with rubisco and a 2 carbon compound from the cytoplasm is made into CO2 using ATP

22
Q

Rubisco evolution

A

Long time ago because many bacteria and archaea have them

23
Q

Why does rubisco accept oxygen

A

In its evolutionary phase there was little oxygen present therefore it was not a problem the enzyme needs to fix

24
Q

Oxygen and rubisco

A

A competitive inhibitor in a process called oxygenase

25
Q

Oxygenase

A

Results in 1, phosphoglycerate and 1, 2 carbon phosphoglycolate. No carbon gain

26
Q

Phosphoglycolate

A

Cant be processed by cells. When it is broken down by cells toxic glycolate is produced and takes carbon with it as it is expelled

27
Q

Rubisco in the lab

A

In equal parts has a higher affinity for CO2, but in the real world there is much more oxygen that CO2 in the air.

28
Q

Rubisco reaction rates

A

1/4 is oxidation, 3/4 is carboxylation

29
Q

Carbon-concentrating mechanisms

A

In algae because water doesn’t have enough CO2

30
Q

Carbon-concentrating mechanisms function

A

It pumps inorganic carbon in keeping the concentration in the cell high

31
Q

Bicarbonate

A

Most used carbon in water plants. Pumped into the cytosol to become CO2 by an ATP dependent transported on the plasma membrane. CO2 then diffuses to the rubisco site to keep the concentration high

32
Q

2 problems of land plants

A

Photorespiration and water loss. They are connected

33
Q

Stomata

A

Holes in the plant leaves to allow for gas exchange. The diffusion determines the direction of CO2 in or )2 and H2O out

34
Q

Stomata regulation

A

Done by the plants when they need, and nothing more

35
Q

Why is oxidation worse in heat

A

All gas concentration decreases in heat but CO2 more rapidly. Therefore there is more oxygen bonding to the rubisco

36
Q

C4 cycle

A

A second carbon fixation pathway to reduce photorespiration

37
Q

C4 cycle process

A

CO2 and 3 carbon PEP — oxaloacetate– malate– transportation to the Calvin cycle– oxidation– pyruvate and CO2— PEP

38
Q

Oxaloacetate

A

First product of C4. A 4 carbon chain

39
Q

C3 vs C4

A

Distinguishes plants with or without the C4 cycle

40
Q

Key distinction C3 and C4

A

Carboxylation reaction. C4 uses PEP carboxylase which is faster and can’t accept oxygen

41
Q

C4 location

A

The mesophyll cells (the ones near the surface of the plant

42
Q

Malate movement

A

Into the bundle sheath cells (not exposed to oxygen) where the calvin cycle makes them pyruvate and CO2

43
Q

Why don’t all plants use C4

A

Every cycle uses 1 more ATP, it is good in the heat because there is lots of light and ATP with low CO2. But in colder climates it is worse

44
Q

Why is C4 better for dry climates

A

In C3 the stroma had to stay open longer losing water

45
Q

CAM plants

A

Crassulaceae acid metabolism. Plants switch between C3 and C4 reaction

46
Q

CAM at night

A

Stomata’s open to release oxygen and bring in CO2, C4 works to make malate, and pyruvate is turned back into malate

47
Q

In the day CAM

A

Stamata’s close, malate diffuses and is oxdized to pyruvate molecules, the Calvin cycle occurs

48
Q

Plants

A

Photosynthesis in ones with chloroplast, cellular respiration happens in them all.

49
Q

Photosynthesis vs cellular respiration

A

Opposite products vs reactants, both involve an ETC and G3P