systemic bacteriology 2 Flashcards
what is a microbiome
community or its associated genetic material associated with host during health or disease. Includes potential pathogens
what is pathogenesis
endogenous bacteria shifting to a parasitic lifecycle requires adaptation. Colonize and invade – evade host defences – complete life cycle – exit host. Host is damaged
what is a pathogen
a harmful organism that produces a pathology. Virulence, & virulence factors
commensal/mutualism/symbiosis
an organism that is part of the normal flora. often mutualistic relationship. endogenous
opportunistic pathogen
an organism that causes infection when opportunity/change in natural immunity arises
what is containment
an organism that is growing in a culture by accident
what is virulence
the capacity of a microbe to cause damage to the host
aerobic gram negative cocci
appears in pairs (diplococci) on gram film. 10 species, 2 pathogenic. N.meningitidis and N.gonnorrhoea
which gram negative bacteria is normal bowl flora in GI tract
escherichia coli
definition of coliforms
term used to describe species of Gram-negative bacilli that look like Escherichia coli (E. coli) on Gram film and when cultured on blood agar. part of normal flora
characteristics of coliforms
- Grow best aerobically but can also grow anaerobically
- Many of them are part of normal bowel flora
how do coliforms cause infection
- Any coliform that gets into a normally sterile site can cause serious infection for example; UTI, peritonitis, biliary tract infection
where are endotoxins and cytokines present
outer membrane of gram -ve bacteria
what is sepsis
a host response to severe infection
how does sepsis occur
- Small blood vessels become “leaky” and lose fluid into the tissues
- Lower blood volume requires heart to work harder to maintain oxygenation of tissues (↑HR)
- Poor tissue oxygen perfusion means blood supply to less essential organs (skin, kidneys, liver is shut down to try to maintain blood supply to brain
- Blood clotting system is activated causing blood clotting in tiny blood vessels→ uses up all clotting factors→ increased risk of haemorrhage
- Symptoms include fever production
how does fever effect pathogens
- Fever is defined as temp >38oC
- Most human pathogens grow best at 37oC * growth starts to slow if temp increases
- Raising the core temperature is an adaptive response and is beneficial in fighting infection
- However, harm may also result from fever
range of host response to infection
Infection > sepsis > severe sepsis > septic shock
common gram positive pathogens
- Streptococcus, enterococcus, staphylococcus, clostridia
- Streptococcus is the most significant
how is pneumonia caused
- An acute inflammation of the lungs, often caused by inhaled pneumococci of the species Streptococcus pneumoniae. The alveoli and bronchioles of the lung become plugged with a fibrous exudate.
what is Streptococcus pneumoniae
- Gram positive haemolytic cocci
- Part of normal upper respiratory tracts flora in many people
- Most common cause of pneumonia
- 90+ different types, vaccine available to fight 23
- Majority of strains are sensitive to penicillin
what is non haemolytic streptococci
- Most important group is the Enterococci
- Part of the normal bowel flora
- Not particularly pathogenic, but can cause problems if they get into a normally sterile site,
- Common cause of urinary tract infection
Most strains sensitive to amoxicillin