Microbiology Flashcards
What are the indications for SIRS?
Temp:
>38
<36
Heart rate:
>90
Tachypnoea
>20 bpm
<4.3kpa pCO2
White cell:
<4
>12
Define Sepsis:
Life threatening organ damage caused by dysregulated host response.
Define Severe Sepsis:
Sepsis + Organ Damage or hypo-tension
Define Septic Shock:
Severe sepsis \+ <60mmHg (MAP) \+ Serum Lactate >18mg/dl
What are the Sepsis 6:
- Oxygen
- Cultures
- IV antibiotics
- Fluid Resuscitation
- Lactate
- Urine Output
(7. Review)
What are the two types of Necrotising Fasciitis?
Type I: Synergestic
- aneorobes
- aerobes
- affect old people
Type II:
Group A, Beta haemolytic Strep
*affects young
In Necrotising fasciitis, there is a discolouration that occurs under the skin due to bleeding, what is this called?
Ecchymosis
What organisms are usually implicated in Biliary sepsis
Coliforms - E.coli
Klebsiella
Enterobacter
What is Chronic Granulomatous disease?
X-linked condition leading to defects in the NADPH oxidase
leukocytes can’t kill things
If there is spleen damage, what infection are people prone too?
Nisseria Meningitis
Haemophilus infleunza
Strep Pneumonia
In a solid organ transplant patient, what is the likely infections <1 month after procedure
C. Diff
MRSA
Gram Neg
In a solid organ transplant patient, what is the likely infections >6 month after procedure
Pneumococcus
Listeria
Salmonella
Legionella
What are common infections seen in immunosupressed individuals, especially after transplant?
Cytomegalovirus
- pneumonia
Candida infection
Pneumocystisi Jerovecii
Asprgillus
- common in marrow transplant
HSV
VZV
What does C. Diff grow in?
Brazier’s media
Name the slow-lactose fermenting gram negative bacteria
Serratia
Citrobacter
Name the coccobacilli gram negatives:
Bordetella
Haemophillus
Name the non-lactose fermenting gram negatives:
Pseudomonas
Proteus
Stenotrophomanas
Salmonella
Yersinia
What two bacterial infections are commonly associated with poultry?
Salmonella
Campylobacter
What are the two major bacterial causes of septic arthritis?
S. Aurues
- older
Nesiseria Gonorrhoeae
- younger females
What infections commonly cause vesicular rashes?
Herpes simplex
Varicella Zoster virus
Coxsackievirus (hand foot and mouth)
What virus is most commonly associated with hand foot and mouth disease? what are some other strains?
Coxsackievirus A16
A6
A10
Enterovirus 71
In the VZV, when are children ineffective by?
48hrs prior to rash onset.
~12day mark.
usually 1-2weeks of fever and malaise
What is it called when there is continual pain following zoster infection?
Post hepatic neuralgia
What are some complications to immunosupressed of VZV?
Bacterial infection in the skin
Disseminated varicella
Haemorrhagic varicella
VZV pneumonitis
VZV encephalitis
What is reasonably unique symptom to Hand foot and mouth disease?
Herpangina
- posterior oropharyngeal vesicualr rash
- painful
- ulcertation
What tests are performed when checking for STDs?
Blood test:
- HIV
- Syphilis
- Hep B
Swabs
- Gonorrhoea
- Chlamydia
which used the Nucleic Acid Amplification Test
Whats the incubation time for gonorrhoea?
2-7 days
What’s the treatment for Gonorrhoea?
Ceftriaxone \+ Azithromycin \+ Doxycycline (for chlamydia cover)
What’s the incubation period for Chlamydia Trachomatis?
7-12 days
What’s the treatment for Chlamydia?
Azithromycin
What is the incubation period for Treponema Pallidum? (Syphilis)
2 weeks
What is the offical name for syphilis
Trepnema Pallidum
What agar plate can be used for isolation of salmonella and shigella species? and what colour do the various pathogens produce?
Xylose Lysine Deocycholate Agar
salmonella: red with black centres
Shigella: Red with no black centres
What bacteria is commonly associated with toxic shock syndrome via its toxins?
Staph Aureus
Which bacteria is commonly associated with pharyngitis?
Strep Pyogenses - Group A. Beta Haemolytic
How is sepsis assessed at the bed side?
QSOFA
- hypotensive <100mmHg systolic
- Tachyponea >22
- Confusion, lowered GCS
Whats the most likely cause of meningitis in children aged between 1 month - late childhood
Meninigiococcus - nessiera meningitis
whats the most common cause of LRTIs in neonates?
Group B, Strep
Whats the most common cause of LTRIs in older children?
Mycoplasma Pneumonia
What the most common cause of meningitis in neonates?
Group B Strep
What makes up the vaccine for pneumococcal?
Capsular polysaccharides
What is the downside of polysaccharide vaccines?
They don’t produce as much of a response against the antigen that protein derived types.
thus conjugate proteins can be added sometimes
Outwith one’s own immunity how can vaccines be useful?
Produce herd immunity
What the most common presentation of invassive Haemophilus Influenza?
meningitis
What is the under lying virus of Cytomegalovirus?
Human herpesvirus 5
HHV - 5
really hard to prevent transmission of this virus.
What is the underlying cause of kaposi tumour?
Human Herpvesvirus 8
HHV - 8
What are the waves of Pendemics?
1st wave:
- high infection rates
- low mortality
2nd wave:
- higher infection rates
- high death rate
3rd wave:
- large population of world exposed
- few people not exposed
What leads to epidemics?
Antigenic Drift
What leads to pandemics?
Antigenic Shift
Whats the two most common subtypes of Influenza Type A?
H1N1
H3N2
What kind of virus is influenza?
Segmented Negative stand RNA
What commonly causes Necrotising facititis in young people?
Strep Pyogenes group A which produces a supertoxin.
What produces scarlet fever?
Strep Pyogenes
Whats the major virulence factor in rheumatic fever?
M protein /
found on the cell wall on the pyogenes.
It promotes a very strong humoral response.
What common infections does S. Pneumonia cause?
MOPS
- Meningitis
- Otitis Medias
- Pneuomnia
- Sinusitis
What is the different between adult and child vaccines for S. Pneuomnia?
Adult - polysaccarihe - IgM - not long lasting
Child - polysaccharide + conjugated protein = IgG - long lasting
What are the stages of epidemiology of infectious disease to susceptible host?
Reservoir
- people
- animals
- phones
Mode of transmission
- airborne
- contact
- vector
Susceptible host
What are the modes of transmission?
Direct
- contact
- droplet
Indirect:
- airborne
- vehicle borne - water
- vector borne - mechanical, biological
What are the standard precautions to infection control?
Hand hygiene
PPE
Cough Hygiene
Prevention of needle sticks
Waste disposal
Environmental cleaning
Gown wearing