Lecture 4 Flashcards

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1
Q

Archaea are ____karyotes, so they ____ have a nucleus.

A

prokaryotes, do not have a nucleus

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2
Q

Rather than peptidoiglycan, Arachae have …

A

pseudopeptidoglycan

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3
Q

Rather than a phospholipid bilayer for a membrane, Arachae have a phospholipid _____ that uses _____ rather than ester links, leading to ________ chains of lipids.

A

monolayer, ethers, branched chain

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4
Q

Ways Archae are similar to bacteria

A
  • circular genome
  • has operons
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5
Q

Archae similarities to eukaryotes

A
  • has interons
    -RNA Polymerase has TBP, TFB
  • has proteins similar to histones
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6
Q

For pseudopeptidoglycan, the disaccharide uses NAG and ____.

A

NAT

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7
Q

Name the two groups of Archaea discussed in class

A
  • euryarchaeota
  • crenarchaeota
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8
Q

What is the unique lipid found in Crenarchaeota?

A

Crenarchaeol

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9
Q

What is the upper temperature limit for microbial life?

A

Labs suggest 140-150 F, however it is likely higher

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10
Q

Adaptations to life at high temperature include stablizing of monomers using the protective effect of ____ _____ of cytoplasmic solutes and the use of more _____-_______ molecules.

A

high concentrations, heat-stable

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11
Q

Adaptations to life at high temperature include protein folding structural features that improve thermostability like _____ _______ cores and increased ______ ____ on protein surfaces.

A

highly hydrophobic cores, increased ionic interactions (salt bridges)

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12
Q

What are chaperones and what do they do?

A

A class of proteins that refold partially denatured proteins

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13
Q

This is a major chaperonin protein complex in Pyrodictium.

A

Thermosome

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14
Q

Adaptations to life at high temperature include DNA stability by having high ______ ____ stabilize DNA and a reversed coil that introduces _____ ______ into DNA.

A

high intracellular solute levels, positive supercoils

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15
Q

Adaptations to life at high temperature include DNA stability with high intracellular levels of _______ to stabilize DNA and RNA.

A

polyamines

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16
Q

Adaptations to life at high temperature include DNA stability by having DNA-binding proteins called _____ that compact DNA into nucleosome-like structures.

A

histones

17
Q

Adaptations to life at high temperature include lipid stability by possessing dibiphytanyl _____ ___ _____; form a lipid monolayer membrane strucure.

A

tetraether type lipids

18
Q

Adaptations to life at high temperature include SSU ____ _____ by having a higher GC content.

A

rRNA stability

19
Q

While many Crenarchaeota prefer ___ temps, some are _______, especially in the ocean.

A

high, mesophilic (moderate temp)

20
Q

A mesophilic Crenarchaeota known as Nitrosopumilales _____ ______, fix _____.

A

oxidized ammonia, fix CO2

21
Q

Some Crenarchaeota live as psychrophilic temps and are found in ____ and _____ in _______.

A

in ice and seawater in Antartica.

22
Q

The Euryarchaeota are known as the ______.

A

Methanogens

23
Q

How many orders of Euryarchaeota?

A

5

24
Q

Euryarchaeota: Halophiles tolerate thier high salt environments by having _____ pump out H+ and _____ pump out Cl-.

A

Bacteriorhodopsin, halorhodopsin

25
Q

Some Euryarchaeota: Halophiles can move by _____.

A

phototaxis

26
Q

_______ are methanotrophs, which is the opposite of methanogenesis.

A

Archaeoglobales

27
Q

New Euryarchaeota species being discovered include…

A
  • Korarchaeota
  • Thaumarchaeota
  • Nanoarchaeota
28
Q

Where would the DNA in an archaea be found?

A

nucleoid

29
Q

What pigment do some archaea use to capture light energy?

A

Bacteriorhodopsin

30
Q

What group of microbes includes the methanogens?

A

Euryarchaota

31
Q

When were arachae first described as a group?

A

1970s