Lecture 2 Notes (Part 3) Flashcards
Primer
Is a short strand of RNA or DNA that serves as a starting point for DNA synthesis
What is required for DNA replication and why?
- Primer
- Because the enzymes that catalyze this process (DNA polymerase) can only add new nucleotides to an existing strand of DNA
How many nucleotides typically make up a primer?
20
What is a major advantage for quantitative PCR and molecular probing? (2)
- Can be very specific
2. Does not require growth
What is a community?
- Whittaker, 1975
A system of organisms living together and linked together by their effects on one another and their responses to the environment they share
What is a community?
- Ricklefs and Miller, 2000
The many population of the many different organisms that we see in a particular place and that are tied to one another by feeding relationships
Neutralism
Lack of interaction between 2 populations
When is neutralism more likely to occur? (2)
- Between populations with extremely different metabolic capabilities
- Populations that are spatially distinct from each other
Commensalism
An association between two organisms in which one benefits and the other derives neither benefit nor harm
Synergism
2 populations are both benefiting from the relationship but when the relationship is NOT obligatory
What do methanogens produce? How?
Methane from fermentation of acetate or reduction of CO2 with H2 from the oxidation of propionate or butyrate and caproate
What do methanogens provide? What does it allow?
- H2 sinks for syntrophic bacteria
- Allows for counting of growth
- if too much H2 it will shut down
Mutualism (symbiosis)
Obligatory relationship between 2 populations that benefits both populations
What are 2 examples of mutualism?
- Lichens with a fungus
2. Mycobiont provides support and nutrient transport to phycobiont
Competition
A negative relationship between 2 populations in which both populations are adversely affected with respect to their survival and growth
When does competition occur?
When 2 populations use the same resources, which limits nutrients and space