Glossary Flashcards
absorption
tissue is penetrated by, or absorbs, a dye solution and becomes colored without any other chemical change or chemical reaction occurring. An example is the absorption of oil red O or Sudan black B by fat.
achromatic
without color or not easily stained. In microscopy, achromatic lenses are corrected for 2 colors, red and blue. This helps produce images free of chromatic aberrations.
acid mucosubstances
a term used to include both the acid mucopolysaccharides (connective tissue mucins) and the acidic glycoproteins (epithelial mucins). Most acid mucopolysaccharides contain sialic acid. Acid mucopolysaccharides and acidic glycoproteins do not stain the same with all mucin techniques.
acidophillic
a basic (cationic, positively charged) substance that is easily stainable with acid dyes. An example is cell cytoplasm, which is readily stainable with the acid (anionic, negatively charged) dye eosin.
additive
a chemical or substance that adds on to, or combines with, another substance, usually improving, strengthening, or altering it. Many fixative molecules add on to tissue proteins, altering and stabilizing them in the process.
adeno-
a prefix denoting a relationship to a gland
adenoma
a benign tumor of epithelial tissue with glandular origin or characteristics, or both
adenocarcinoma
a cancer of epithelial tissue that has a glandular origin
adsorbtion
the accumulation of stain by the surface of a tissue component. this phenomenon is influenced by the affinity of oppositely charged ions for each other (electrostatic attraction or bonding)
aldehyde
an organic compound containing carbon, oxygen, and hydrogen arranged C=O and C-H
aliphatic hydrocarbon
organic chemical compound composed of carbon and hydrogen, in which the carbon atoms are linked in an open chain rather than a ring arrangement. Aliphatic hydrocarbons can be used as clearing agents
amphoteric
describes a substance that is capable of acting as either a base or an acid, depending on the pH of the solution
anaplasia
dedifferentiation, loss of cellular differentiation, or reversion to a more primitive form
angstrom
a unit of length equal to 100 millionths (10^-8) of a centimeter, or 10^-10 meters. This unit has been replaced by nanometer nm as the official unit of measurement. One nanometer is equal to 10A or 10^-9 meters
anion
a negatively charged dye or tissue component. Anionic substances are also referred to as acidic, although it has nothing to do with pH.
anisotropism
having unlike properties in different directions, or unequal in refracting power
anthracotic pigment
an accumulation of carbon from inhaled industrial pollution, cigarette smoke, or coal dust. The pigment is seen most frequently in the lungs or in lymph nodes from that area
antibody
commonly known as immunoglobulins, antibodies are proteins that are produced by B lymphocytes in response to antigenic stimulation
antigen
any substance that can induce a detectable immune response
antigen enhancement
epitopes can be exposed or “unmasked” by either heat or enzymes, thus enhancing the antigen-antibody reactivity
antigenic determinant
the area of an antigen that determines the specificity of the antigen-antibody reaction
apochromatic
corrected for both spherical and chromatic aberration. Apochromatic microscope objectives have been corrected for 3 colors and other lens aberrations
aqueous
a solution prepared in water
argentaffin
a reaction in which certain tissue components have the ability to bind or be impregnated with silver ions and then reduce the silver to its visible metallic form
argyrophilic
the ability to bind or be impregnated with silver ions: however, a reducing agent is required to reduce the silver to its visible metallic form
aromatic hydrocarbon
organic chemical compound composed of carbon and hydrogen, in which the carbons are linked in a ring arrangement. Aromatic hydrocarbons are used as clearing agents.
artifact
a structure or substance not normally present but produced by some external force or action. examples are mercury pigment, tissue floaters, knife lines, and air bubbles
autolysis
destruction or digestion of tissues and cells by the enzymes normally present in the cells
auxochrome
the chemical group present in a dye that causes it to bind to certain tissue elements. This group can develop a charge (+ or -) and thus bind to oppositely charged groups present in the tissue. The amino (NH2) and carboxyl (-COOH) groups are frequently occurring auxochromes
axon
the nerve process that conducts impulses away from the cell body of the neuron. Neurons have a single axon. Axons are included along with dendrites in the term “nerve fibers”; axons have also been referred to as the axis cylinder
bacilli (singular bacillus)
rod shaped bacteria
bacteria (singular bacterium)
single cell microorganisms
barcode
an optical machine representation of data related to the object to which it is attached. Linear, or one dimensional, barcodes represent data by a series of parallel lines of varying width and spaces. 2-dimensional (2D) barcodes use dots, hexagons, and other geometric patterns to represent data
basophilic
an acidic (anionic, negatively charged) substance that is easily stainable with basic (cationic, positively charged) dyes
bevel angle
the angle made when the 2 cutting facets of a microtome knife intersect. On most American-made knives, the bevel angel is 28 to 32 degrees
binocular
having 2 oculars. a binocular microscope has two eyepieces or oculars
birefringence
splitting of a light wave into 2 waves that are refracted in different directions. this phenomenon is also referred to as anisotropsism or double refraction
buffer
a solution containing acid and alkaline components in the desired concentration so that the pH will be maintained when small amounts of acids or bases are added
carbohydrate
compounds containing, carbon, hydrogen, and oxygen only. Included are sugars, starches, and cellulose.
carcinoma
a malignant new growth arising from epithelial tissue
catalyze
to modify, speed up, or slow down a reaction without being consumed in the process. Enzymes catalyze biological reactions
cation
a positively charged dye or tissue component. Cationic substances are also referred to as basic
chelation
forming a ring compound by joining a chelating agent to a metal ion. Chelating agents are organic compounds. An example is ethylenediaminetetraacetic acid EDTA, which decalcifies by binding calcium ions
chromatic aberrations
the distortion of color in an image produced by a microscopic lens
chromatin
the stainable material (a complex of nucleic acids and protein) in the nucleus.
dispersed chromatin (euchromatin)
DNA that is active in RNA synthesis
condensed chromatin (heterochromatin)
DNA that is not active in RNA synthesis. Hematoxylin stains only heterochromatin
chromagen
a benzene derivative containing a color-bearing group, or chromophore
chromophore
the chemical grouping that bestows the property of color on a compound
cirrhosis
diffuse fibrosis or sclerosis of any organ, especially the liver
clearance angle
the angle formed by the intersection of the block face and the adjacent cutting facet of the knife. This angle should be ~3-8 degrees
clearing
process of replacing the alcohol (dehydrating agent) with a reagent that is miscible with paraffin. Most clearing agents leave the tissue transparent, hence the name clearing agent
clone
a group of cells that are all derived from a single progenitor cell, all having the same characteristics as one another
coagulation
cloudiness, flocculation, and clot formation are stages of grades in the process of coagulation Several reagents coagulate protein sols during the process of fixation
flocculation
In colloid chemistry, flocculation refers to the process by which fine particulates are caused to clump together into a floc. The floc may then float to the top of the liquid (creaming), settle to the bottom of the liquid (sedimentation), or be readily filtered from the liquid.
cocci (singular coccus)
spherical or spheroid bacteria
decalcification
the process of removing calcium from bone or tissue, thus allowing routine microtomy on paraffin embedded material
decolorization
the removal of color, or excess color, from tissue. Only some tissue components are decolorized in a process known as regressive staining. Common decolorization methods involve the use of acidic or basic solutions, excess mordant (typically an inorganic oxide, that combines with a dye or stain and thereby fixes it), or oxidizers
dehydration
the removal of water from tissue. This is usually accomplished using alcohols
denaturation
to change the nature of. fixatives denature proteins by changing the soluble (liquid) contents of the cell into insoluble substances so that those substances are not lost during the subsequent processing steps. This change can be caused by either chemical (fixative solutions) or physical (heat, desiccation) means. Denaturation causes the protein molecule to unfold and the internal bonds to become disrupted
denatured alcohol
ethyl alcohol containing another reagent that has been added to make the alcohol undrinkable. Frequently methyl or isopropyl alcohol are used to denature ethyl alcohol
differentiation
excess stain is removed from a tissue section, so that only the desired element is left stained and may be visualized easily against the colorless or counterstained background
endogenous
pigments or minerals that arise or are produced from within the body
enzyme digestion
the use of enzymes to digest certain tissue components. examples are the use of diastase to remove glycogen, or hyaluronidase to remove some types of connective tissue mucin
enzymes
proteins that catalyze chemical reactions in biological systems
epithelium
a layer of cells that covers or lines all the free, open surfaces of the body including the skin and mucus membranes that communicate with the outside
epitope
the simplest form of antigenic determinant present on a complete antigenic molecule
esterases
hydrolytic enzymes that act on carboxylic acid esters of alcohols, phenols, and naphthols
exogenous
pigments or minerals that originate from outside the body
Fire triangle
fuel, oxygen, and an ignition source form what is known as the fire triangle. all 3 of these elements are necessary for a fire
fixation
the stabilization of protein