Genetics: From Whole Chromosomes to Single Bases Flashcards

1
Q

how is a chromosome recognised

A
  • centromere position
  • length
  • banding patters with specific stains
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2
Q

what is the make up of a chromosome

A
  • telomeres at either end
  • centromere
  • short arm (p)
  • long arm (q)
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3
Q

what are acrocentric chromosomes and what are they liable to

A
  • chromosomes that can lose their short arm without consequences for that individual
  • translocations
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4
Q

aneuploidy

A

whole extra/missing chromosome

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5
Q

balanced translocation/re-arrangement

A

all genetic material is present

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6
Q

unbalanced translocation/re-arrangement

A

genetic material is missing or extra (1/3 copies)

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7
Q

what is a robertsonian translocation and what does it pose a risk of

A
  • two acrocentric chromosomes stuck end-to-end, translocation
  • risk of trisomy in offspring
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8
Q

why is X-chromosome aneuploidy better tolerated

A

X-chromosome inactivation

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9
Q

what do unbalanced translocations result in in pregnancy

A
  • miscarriage

- dysmorphic delayed child

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10
Q

FISH

A

fluoresent in-situ hybridisation

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11
Q

what does FISH detect

A

chromosomal abnormalities

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12
Q

how does FISH work

A
  • maps all the genetic material in a cell and targets a specific sequence
  • flurescent markers are attached to this sequence and you are now able to see if its present
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13
Q

what does an aCGH detect

A

detects deletions/duplications - any size imabalance but not balanced translocations

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14
Q

how do an aCGH work

A

takes the entire genome and compares it to a reference sample

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15
Q

what indicates deletions in aCGH

A

half as much DNA on the graph compared to reference

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16
Q

what is 1st line chromosome testing

A

aCGH

17
Q

what does karyotyping detect

A

any change in chromosomes - un/balanced

18
Q

how does PCR testing work

A

sequence a small section of DNA many times - useful to sequence tiny changes but need to know which stretch to sequence

19
Q

how does NGS work

A

used instead of PCR

- can sequence the whole genome or just exons and is used to show differences between the normal and whats sequenced

20
Q

mocaicism

A

different cells having a different genetic makeup (chromosomal or point)

21
Q

somatic mocaicism

A

changes in DNA that are not inherited but happen during proliferation

22
Q

partial trisomy

A

an extra ‘chunk’ of chromosome as a result of parental balanced translocation

23
Q

what is a homologous chromosome

A

the same chromosome repeated (i.e. during mitosis) - same centromere position, length and band sequence