Generalities Flashcards
What are your mobile genetic elements?
- Bacteriophage
- Plasmids
- Transposons
[Prokaryote/Eukaryote]
DNA within a nuclear membrane
Eukaryotes
[Prokaryote/Eukaryote]
membrane bound organelles
Eukaryote
[Prokaryote/Eukaryote]
50S + 30S ribosomes
prokaryotes
[Prokaryote/Eukaryote]
60S + 40S ribosomes
eukaryote
____ is the rate at which particles if a given size and shape travel; rate at which a molecule sediments under the centrifugal force of a centrifuge
Svedberg unit
___ is the area where prokaryotes store their genetic information
nucleoloid
___ are the only bacteria with sterols in their cell membrane
mycoplasma
[Prokaryote/Eukaryote/Viruse]
has either DNA or RNA
No ribosomes
has protein capsid
has lipoprotein envelope
virus
[Prokaryote/Eukaryote/Viruse]
has both DNA and RNA 70S ribosomes no mitochondria some are motile divide by binary fission
bacteria
What is the Svedberg unit for the ribosomes of the fungi
80S
____ also refers to jumping genes
transposon
What are the two methods of transposition?
- Cut and paste (direct)
2. Copy and paste (replicative)
___ are non cellular infectious proteins
prions
pathological prions predominantly have what secondary structure
beta sheets
[Prion Disease]
PrPSc accumulates in which part of the cell?
Endosome
[Prion Disease]
Higher cortical dysfunction leading to dementia
CJD
[Prion Disease]
Cerebellar manifestation then to dysdiadochokinesia, ataxia, myoclonic jerks
Kuru
[Prion Disease]
mad cow disease is also known as
Bovine spongiform encephalopathy
What is the required standard autoclave conditions?
121 deg C
15 to 20 mins
15 psi
[Bacterial Structure]
What enzyme crosslinks the sugar backbone to a peptide side chain to make bacterial cell wall
transpeptidase
What bond forms between NAM and NAG in the peptidoglycan?
beta 1-4 glycosidic bond
[Gram + or Gram -]
presence of lipopolysaccharide and periplasmic space
Gram negative
think
[Gram + or Gram -]
presence of teichoic acids
Gram positive
Thick, multilayer
Gram Negative cell walls contain endotoxin consist of ____
Lipid A and Lipid O
___ gram positive bacteria that has endotoxin
Listera monocytogenes
What are the steps in gram staining?
- Primary stain - crystal violet
- Mordant - iodine
- Decolorizing - acetone
- Counterstain - safranin
What is the primary stain to detect mycobacteria?
Carbol fuchsin
What is the mordant used in AFB smear?
steam heating
What is the counterstain used to detect mycobacteria?
Malachite green or methylene blue
[Diagnostic modality]
spirochetes
darkfield microscopy
[Diagnostic modality]
legionella
silver stain
[Diagnostic modality]
Chlamydiae
Giemsa stain –> inclusion bodies
[Diagnostic modality]
rickettsiae
Giemsa/Tissue stains
What are the bacteria not seen in gram stain
- Treponema
- Rickettsia
- Mycobacteria
- Mycoplasma
- Legionella
- Chlamydia
[Essential Components of bacteria]
Site of oxidative and transport enzyme
cytoplasmic membrane
[Essential Components of bacteria]
protein synthesis
ribosome
[Essential Components of bacteria]
genetic material
nucleoid
[Essential Components of bacteria]
participates in cell division and secretion
mesosome
[Essential Components of bacteria]
contains many hydrolytic enzymes, including beta lactamases
periplasm
[Non-essential Components of bacteria]
protect against phagocytosis
capsule
polysaccharide
[Non-essential Components of bacteria]
for attachment and conjugation
pilus or fimbria
glycoprotein
[Non-essential Components of bacteria]
mediates adherence to surfaces
glycocalyx
polysaccharide
[Non-essential Components of bacteria]
for motility
flagellum
protein
[Non-essential Components of bacteria]
resistance to heat and chemical
Spore
keratin-like coat, dipicolinic acid
[Non-essential Components of bacteria]
genes for antibiotic resistance and toxins
plasmid
[Non-essential Components of bacteria]
site of nutrients in cytoplasm
granule
The capsule of bacillus anthracis is composed on ____
polypeptide of D-glutamate
Quellung reaction is also called ___ reaction
Neufeld reaction
___ is an extrachromosomal, double stranded, circular DNA capable of replicating independently
plasmids
plasmids can be integrated into the bacterial chromosome called ____
episomes
Plasmids are significant for bacteria since it plays a role in ____
- Antibiotic resistance
- Resistance to heavy metals
- Resistance to UV light
- Pili
- Exotoxin and enterotoxin
- beacteriocin
In conjugation, who creates a conjugation pilus? (Donor/Receptor)
Donor
It creates a cytosolic bridge
[Method of microbial control]
destroys or eliminates ALL forms of microbial life, including spores
Sterilization
autoclaving
[Method of microbial control]
eliminates many or all pathogenic microorganisms, except bacterial spores in inanumate object
Disinfection
like applying rubbing alcohol
[Method of microbial control]
reduction or removal of transient microbial flora
antisepsis
[Method of microbial control]
disinfection of living tissue or skin of a patient
antisepsis
[Method of microbial control]
Reduction of microbial contamination to an acceptable level
sanitization
[Method of microbial control]
physical removal of microorganisms by using soaps or detergents
Degerming or cleaning
[Method of microbial control]
handwashing with soap and running water
degerming or cleaning
[Phase of bacterial growth]
depletion of metabolite as the result of unfavorable condition; zero growth rate
Phase 1 - lag phase
- adaptation to new environment
- Incorporation of nutrients
[Phase of bacterial growth]
vigorous metabolic activity but cells do not divide
Phase 1 - lag phase
[Phase of bacterial growth]
beta-lactams act during this phase
Phase 2 - log or exponential phase
[Phase of bacterial growth]
rapid cell division occurs
Phase 2 - log or exponential phase
[Phase of bacterial growth]
spore formation
Phase 3 - stationary phase
[Phase of bacterial growth]
exhaustion of nutrients or the accumulation of toxic products; ZERO growth rate
Phase 3 - stationary phase
[Phase of bacterial growth]
negative growth rate
decline or death phase
[Bacterial oxygen metabolism]
What are the toxic products of oxygen metabolism
- Superoxide - Superoxide dismutase
2. Hydrogen peroxide - catalase, peroxidase
[Aerobic metabolism]
completely dependent on oxygen for ATP generation
obligate aerobes
[Aerobic metabolism]
use fermentation, but can tolerate low amounts of oxygen because they have SOD
microaerophiles
[Anaerobic metabolism]
utilize O2 if available but can use fermentation in its absence
Facultative anaerobes
[Anaerobic metabolism]
exclusively anaerobic but insensitive to the presence of O2
Aerotolerant anaerobes
[Anaerobic metabolism]
cannot grow in the presence of oxygen because they lack SOD, peroxidase, catalase
Obligate anaerobes
Cite examples of obligate anaerobes
- Actinomyces
- Bacteroides
- Clostridium
Cite examples of obligate aerobes
- Nocardia
- Neisseria
- Pseudomonas
- Mycobacteria
- Pseudomonas
- Bordetella/Brucella/ Bacillus cereus
- Legionella
[Bacterial Genetics]
DNA transferred by a virus from one cell to another
Transduction
[Bacterial Genetics]
purified DNA taken up by a cell
transformation
[Bacterial Genetics]
DNA is transferred from one bacterium to another
conjugation
[Bacterial Genetics: Conjugation]
Transfer from male to female is ___ (bidirectional/unidirectional)
Undirectional
Male transfers plasmid to female then both becomes male
[Bacterial Genetics: Conjugation]
What part of the plasmid is transferred first?
OriT
[Bacterial Genetics: Conjugation]
What part of the plasmid is transferred last?
tra region
[Bacterial Genetics: Transduction]
___ cycle wherein the new phage DNA are synthesized and assembled into virions
lytic cycle
[Bacterial Genetics: Transduction]
___ cycle wherein phage DNA integrates within the bacterial chromosomes by recombination becoming a prophage
lysogenic cycle
What are examples of your prophage-coded bacteria?
- shigA-like toxin: EHEC
- Botulinum
- Cholera
- Diphtheria
- Erythrogenic toxin
[Normal flora]
mouth
viridans streptoccus
[Normal flora]
dental plaque
streptococcus mutans
[Bacterial adherence]
___ mediates attachment of bacteria
pili
[Bacterial adherence]
___ mediate strong adherence to surface of human cells
glycocalyx
[Bacterial adherence]
___ mediate binding of endothelium and to extracellular proteins such as fibronectin
curli
Like salmonella
[Enzymes in bacterial invasion]
used to spread through subcutaneous tissue
- collagenase
2. hyaluronidase
[Enzymes in bacterial invasion]
accelerates formation of fibrin clot coating the organism with a layer of fibrin
coagulase
[Enzymes in bacterial invasion]
allows adherence to mucous membranes
IgA protease
[Enzymes in bacterial invasion]
destroys neutrophilic leukocyte and macrophages
Leucocidin (Panton-Valentine leucocidin)
What are the bacteria with IgA protease?
SHiNe My Gong
- Streptococcus pneumoniae
- Haemophilus influenzae
- Neisseria meningitidis
- Neisseria gonorrhea
[Virulence factor]
protect against phagocytosis
polysaccharide capsule
[Virulence factor]
opsonization
polysaccharide capsule
[Virulence factor]
S. pyogenes has __ protein
M protein
[Virulence factor]
S. aureus has ___ protein
protein A
[Virulence factor: Toxin production]
Produced by gram negative bacteria only
endotoxin
[Virulence factor: Toxin production]
genes located in the bacterial chromosome, has a lipopolysaccharide chemistry
endotoxin
no vaccine available
[Virulence factor: Toxin production]
Endotoxins are stable even up to this temperature
____ 100 deg C for 1 hour
[Virulence factor: Toxin production]
location of genes of exotoxin
plasmid or bacteriophage
[Virulence factor: Toxin production]
exotoxins are composed of ___
polypeptides
secreted from cell
[Virulence factor: Toxin production]
high antigenicity
exoctoxin
use toxoids as vaccine
[Virulence factor: Toxin production]
Exotoxins are destroyed rapidly at 60 deg C except for ____
Staphylococcal enterotoxin
[Virulence factor: Toxin production]
produced inside the cell as part of their metabolism
exotoxin
[Virulence factor: Exotoxin]
What are the subunits of exotoxin?
A subunit
B subunit
Cite examples of bacteria that employs plasmid?
- Shigella dysenteriae
- ETEC
- B. anthracis
- C. tetani
Cite examples of bacteria that employs phage?
- P. aeruginosa
- S. aureus
- S. pyogenes
- C. botulinum
Cite examples of bacteria that employs bacterial chromosome
- S. aureus
- S. pyogenens
- C. perfrigenges
- P. aeruginosa
- EHEC
- V. cholerae
- B. pertussis
Toxin of S. aureus that alter cellular component
alpha toxin
[Virulence factor: Exotoxin]
Subunit that is that is a toxic subunit
A subunit
B is for binding
Toxin of S. pyogenes that alter cellular component
Streptolysin O
Toxin of C. perfinges that alter cellular component
alpha toxin
Toxin of pseudomonas that alter cellular component
Type III cytotoxin
Toxin of Salmonella spp that alter cellular component
Type III cytotoxin
Toxin of S. aureus that is a superantigen from a bacterial chromosome
TSST-1
Superantigen activate Tcells
Toxin of S. aureus that is a superantigen from a phage
Enterotoxin
Toxin of S. pyogenes that is a superantigen from a bacterial chromosome
Erythrogenic toxin A and C
Diptheriae toxin inhibits what ___
protein synthesis
Toxin of P. aeruginosa that ribosylates EF2?
Exotoxin A
Toxin of S. dysenteriae that inactivates 60S
Shiga toxin
Toxin of EHEC that inactivates 60S?
Shiga-like toxin or Vero toxin
Cholera toxin increases the synthesis of what secondary messenger?
cAMP
What are the toxins of ETEC that increases cAMP by turning on stimulatory G protein
LT toxin
ST toxin
Anthrax toxin increases cAMP synthesis by ___
activating adenylate cyclase activity
Pertussis toxin increase cAMP synthesis by ____
turning off inhibitory G protein
Tetanus toxin inhibits ___ release
NT releasse
Botulinum toxin inhibits ____
acetylcholine release
[Virulence factor: Endotoxin]
What is the toxic component of lipopolysaccharide?
Lipid A
What are the effects of Lipid A?
- Overproduction of cytokine
- Complement cascade
- Coagulation cascade activation
Lipid A activates macrophages leading to increased in what body products
- IL-1
- TNF
- Nitric oxide