Exam 3 (Topic 14) Flashcards
DNA to RNA
Transcription
RNA to Protein
Translation
One DNA gene can produce
many RNAs
Each RNA can produce
many proteins
DNA producing many RNAs which produce many proteins is called
Genetic amplification
Linear polymer of four difference ribonucleotides
RNA
RNA vs DNA
RNA is single stranded
RNA can fold in a variety of shapes through internal base pairing
RNA has enzymatic function in addition to information
Replication vs. Transcription
RNA transcript becomes displaced from DNA template
Only a specific region of the DNA is transcribed
Transcription is carried out by RNA Polymerase
Transcription is carried out by
RNA polymerase
Moves down the DNA helix unwinding the helix as it goes
RNA polymerase (includes its own “helices” activity)
RNA polymerase uses
ribonucleotide triphosphates (ATP, CTP, UTP, and GTP) (hydrolysis of phosphate provides the energy)
RNA Polymerase vs DNA Polymerase
RNA p. links ribonucleotides noth deoxyribonucleotides
RNA p. CAN start transcription without a primer
RNA polymerase makes more mistakes
Primase
RNA Polymerase
In eukaryotes 1 mRNA makes
1 protein
RNA that is transcribed from genes in the DNA to be made into proteins
mRNA (messenger RNA)
In prokaryotes 1 mRNA makes
many proteins
A structural and catalytic RNA that forms the core of the ribosome
Ribosomal RNA (rRNA) (used in translation)
A folded RNA that forms covalent bonds with amino acids and carries the amino acids to sites of translation
Transfer RNA (tRNA)
Small hairpin RNAs that regulate eukaryotic gene expression and the stability of mRNA to control gene expression
Micro RNAs (miRNA) and Small Interfering RNAs (siRNAs)
Procaryotic Transcription COME BACK TO!!!
- RNA p. binds to circular DNA and looks for promoter
2. COME BACK TO!!!!
Specific sequence of DNA indicating the start site for transcription
Promoter
Conserved DNA sequences that direct RNA polymerase during transcription
Promoter
Conserved sequence is -10nt and -35nt from the transcription start site
Upstream promoter
RNA promoters can only bind the promoter
in one direction
Transcription can go
in multiple directions depending on which template strand the promoter is in
Pro vs Eu Transcription
Eu. have 3 RNA polymerases and Pro only has one
Pro requires sigma factor to recognize promoter
Eu requires General Transcription Factors for initiation and promoter recognition
DNA sequence rich in T and A
TATA box; typically located about -25 nt from the start site; thats 25 nucleotides upstream; only present in Eu.
Eucaryotic transcription requires __________ to initiate
General Transcription factors
Eucaryotic Transcription Steps
- TFIID/TBP binds to TATA box and bends DNA
- RNA p. II transcription initiation complex
- RNA p. II phosphorylated by TFIIH and starts transcription
- Dephosphorylation by phophatases stops transcription
Bacteria transcribe and translate
at the same time
Eucaryotes transcribe in
Nucleus
Eucaryotes translate in
Cytoplasm
pre-mRNA
immature mRNA
Two main steps that occur only on pre-mRNA
Addition of 5’ cap and 3’ poly A tail
Occurs after 25 nucleotides have been transcribed
5’ cap
Addition of 7-methylguanosine triphosphate to the 5’ carbon of the first nucleotide of mRNA
5’ cap
Addition of a series of repeated adenine nucleotides to the end of mRNA
3’ poly A tail
Increases the stability of the mRNA, aids in export from the nucleus, and is used during translation to make sure mRNA is fully intact
5’ cap and 3’ poly A tail (only happens in Euc.) (takes place in nucleus)
In bacteria, most mRNA contain
the uninterrupted coding region
In eucaryotes, genes contain both ________ and ____________ called “pre-mRNA”
Exons and Introns
Coding region
Exon
Noncoding region
Intron
Must be removed from mRNA before translation
Introns
Introns are removed by
Splicing (takes place in nucleus)
All noncoding introns are spliced out of a pre-mRNA by the
spliceosome
Not all ______ are included in the final mRNA
exons
mRNAs can undergo
Alternative Splicing
The selective inclusion or exclusion of exons
Alternative Splicing
One pre-mRNA can make
many different mRNA which make different proteins