DNA and Biotechnology Flashcards
dense, transcriptionally silent DNA; found at the centromere
heterochromatin
less dense, transcriptionally active DNA
euchromatin
synthesizes new DNA; reads 3’ to 5’, synthesizes 5’ to 3’; has proofreading ability
DNA polymerase
a set of specialized proteins that assist DNA polymerase in DNA replication
replisome (replication complex)
replisome:
begin unwinding at origin of replication, producing two replication forks on either side of the origin
helicases
replisome:
create nicks in DNA backbone to release torsional strain
topoisomerases
replisome:
puts down RNA primer to allow DNA polymerase to attach to the parent strand and begin synthesizing the new strand
primase
replication bubble:
only requires one primer
leading strand
replication bubble:
requires many primers and contains Okazaki fragments
lagging strand
replisome:
fuses old parent and new daughter DNA strands together
ligase
DNA composed of nucleotides from two different sources
recombinant DNA
introduces a fragment of DNA into a vector plasmid; a restriction enzyme cuts both the plasmid and the fragment, which are left with sticky ends; once the fragment binds to the plasmid, it can be introduced into a bacterial cell and permitted to replicate, generating many copies of the fragment of interest
DNA cloning
the joining of complimentary base pair sequences
hybridization
a process by which millions of copies of a DNA sequence can be created from a very small sample by hybridization
polymerase chain reaction (PCR)
can be used to separate DNA molecules by size
agarose gel electrophoresis
technique used to isolate DNA:
can be used to detect the presence and quantity of various DNA strands in a sample; after electrophoresis, the sample is transferred to a membrane that can be probed with labeled ssDNA molecules that can bind to and indicate a sequence of interest
southern blot
technique used to detect RNA
Northern blot
technique that is used to detect a specific protein; can also be used to analyze post-translational modifications of proteins such as histone acetylation
western blot
a method of curing genetic deficiencies by introducing a functional gene with a viral vector
gene therapy
a technique that separates only on the basis of molecular mass
centrifugation
an immunological assay commonly used to measure antibodies, antigens, proteins and glycoproteins in biological samples
enzyme-linked immunosorbent assay (ELISA)