Chapter 16 The Molecular Basis Of Inheritance Flashcards
Who introduced an elegant double-helical model for the structure of deoxyribonucleic acid?
James Watson and Francis Crick
In 1953
Substance of inheritance?
DNA
Morgan’s group showed that genes are located on chromosomes
What become candidates for the possible genetic material?
DNA and protein
The role of DNA in heredity was first discovered by studying….
Bacteria and the viruses that infect them
The discovery of the genetic role of DNA began with research by ….
Fredrick Griffith in 1928
When Griffith mixed heat-killed remains of the pathogenic strain with living cells of the harmless strain….. what happened?
Some of the living harmless strains become pathogenic
This is called transformation*
When there is a change in phenotype and genotype due to assimilation of foreign DNA
Transformation
Who announced the transforming substance was DNA?
Oswald Avery, Maclyn McCarty, and Colin MacLeod
More evidence of DNA as the genetic material came from studies of…..
A virus that infects bacteria
These are called bacteriophages or phases
A virus that infects bacteria is called?
Bacteriophages or phages
They are widely used in genetics research
Who proved that one of the two components of T2 (DNA or protein) enters an E. coli cell during infection?
Alfred Hershey and Martha Chase
What are Charagaff’s rules?
Base pairings are different among species
The amount of and ratio of base pairings is equal
Who used X-Ray crystallography to study the molecular structure of DNA?
Who produced the image of the DNA molecule using this technique?
Maurice Wilkins and Rosalind Franklin
Franklin
Franklins X-Ray crystallography images of DNA enabled _________ to deduce the width of helix and the spacing of the nitrogenous bases
The width suggested that the DNA molecule was made up of two stands, forming a double helix
Watson
What is the backbone of DNA?
Sugar phosphate backbone
Bases are on the _____ of DNA?
Inside
DNA is stabilized by?
Hydrogen bonds
What are the three components of DNA?
Nitrogenous base (purines or pyrimidines)
Phosphate group
Pentose sugar (deoxyribose)
In DNA replication, the parent molecule unwinds, and _________ daughter strands are built based on base pairing rules
Two new
What were the three alternative models of DNA replication?
Semi-conservative (this one is correct)
Conservative
Dispersive
Who’s experiment supported the semi conservative model?
Meselson and Stahl
Explain Meselson and Stahls model for replication.
Old nucleotides labels with a heavy isotope of nitrogen, while any new nucleotides were labeled with a lighter isotope
First replication produced a band of hybrid DNA, eliminating the conservative model
The second replication produced both light and hybrid DNA, eliminating the dispersive model
Backbone of nucleotides?
Nitrogen
Replication begins at special sites called _______________, where the two DNA strands are separated, opening up a replication “bubble”
Origins of replication
How many sites of origin may a eukaryotic chromosomes have?
Hundreds or even thousands
Replication proceeds in what direction from each origin?
Both directions
At the end of each replication bubble is a …..
Replication fork, a Y-shaped region where new DNA strands are elongating
Are enzymes that untwist the double helix at the replication forks
Unzips or breaks hydrogen bonds
Helicases
Binds to and stabilizes single-stranded DNA until it can be used as a template
This prevents Two stands from coming back together
Single-strand binding protein
Corrects overwinding ahead of replication fork by breaking, swiveling, and rejoining DNA strands
Topoisomerase
- catalyze the elongation of new DNA at a replication fork
- nucleoside triphosphate added to a growing DNA strand
- the rate of elongation is about 500 nucleotides per second in bacteria and 50 per second in human cells
DNA polymerase
- adds nucleotides
- always elongates in a 5’ to 3’ direction because of the OH group
- for the enzyme to work it must be able to bond to OH
DNA polymerase
DNA polymerases add nucleotides only to the free _____ end of a growing strand; therefore, a new DNA strand can elongate only in a ____ to ____ direction
3’
5’, 3’
DNA ploymerases cannot initiate synthesis of a ploynucleotide; they can only add nucleotides to the ____ end
3’
The initial nucleotide strand is a short one called an….
RNA or DNA primer
An enzyme called ___________can start an RNA chain from scratch
Primase
How many primers are needed to synthesis the leading strand?
Only one
Most _____________ require a primer and a DNA template strand
Catalyze the elongation of new DNA at a replication fork
DNA polymerase
This adds RNA, DNA replication starts this way
Initiated by an RNA primer
5’ ——-> 3’ direction
Primase
DNA polymerase dose not start DNA replication. What does?
Primase
Can synthesis a complementary strand continuously, moving away from the replication fork
In a 5’ to 3’ direction
DNA polymerase
________
DNA polymerase 3
Synthesized as a series of segments in the lagging strand called ….
Okazaki fragments
- removes RNA primer from leading and lagging strand
- replaces primer with DNA
DNA polymerase 1
Joins okazarki fragments together
DNA ligase
__________ untwists the double helix and separates the template DNA at the replication fork
Helicase
Binds to and stabilizes single stranded DNA u til it can be used as a template
Single-stranded binding protein
Corrects “overwinding” ahead of replication forks by breaking, swiveling and rejoining DNA strands
Topoisomerase
DNA polymerase removes ______ and replaces it with ______
RNA, DNA
_________ Synthesizes an RNA primer at the 5’ ends of the leading strand and the Okazaki fragments
Primase
_________________ continuously synthesizes the leading strand and elongates Okazaki fragments
DNA pol 3
_________ removes primer from the five prime end of the leading strand and Okazaki fragments, replacing primer with DNA and adding to adjacent three prime end
DNA pol 1
___________ Joins the three prime end of the DNA that replaces the primer to the rest of the leading strand and also joins the lagging strand fragments
DNA ligase
When exposed to UV light, T=T can happen. How is it repaired and what is it called?
Mismatch repair
Polymerase will remove the damage
The DNA replication machine is probably ____________ during the replication process
Recent studies support a model in which DNA polymerase molecules “real in” parental DNA and “extrude” newly made daughter DNA molecules
Stationary
Enzymes cut out and replace damaged stretches of DNA
Nucleotide excision repair
_____________ proofreads newly made DNA, replacing any incorrect nucleotides
In mismatch repair of DNA, repair enzymes correct errors in base pairing
DNA polymerase
The ends of chromosomes are called?
Telomeres
Limitations of DNA polymerase create problems for the linear DNA of eukaryotic chromosomes
The usual replication machinery provides no way to complete the five prime ends, so repeated rounds of replication produce….
Shorter DNA molecules
_______________ do not prevent the shortening of DNA molecules, but they do postpone the erosion of genes near the ends of DNA molecules
Telomeres
An enzyme called _________ catalyzes the lengthening of telomeres in germ cells
Telomerase
It extends, and fills in gaps
This reduces as an organism ages
99% of all types of human cancers have high levels of _____________
Telomerase
Discrete unit of genetic material
And It is composed of _______
Chromosomes
Chromatin- DNA-protein complex
What are the three levels of DNA compaction?
- DNA wrapping
- 30-nm fiber
- Radial loop domains
DNA wrapped around histones to form _________
Nucleosomes
DNA wrapping shortest length of DNA molecule _________
7-fold
Current model suggests asymmetric, 3-D zigzag of nucleosome’s
Shortens length another sevenfold
30-nm fiber
- interaction between 30 nm fibers and nuclear matrix
- each chromosome located in discrete territory
- levels of compaction of chromosomes not uniform (hetrochromatin, euchromatin)
Radial loop domains
When cells prepare to divide, chromosomes become….
Even more compacted
When chromosomes are not as compact (this is when they are being used)
Euchromatin
When chromosomes are much more compact (off/not being used)
Metaphase chromosomes highly compacted
Hetrochromatin