3/30 micro Flashcards
Lipoteichoic acid
- where is it found?
- induces what?
Gram (+) cell wall.
- teichoic acids only found in gram (+)s.
- induces TNF & IL-1.
Outer membrane
-whats the antigen?
O polysaccharide
Periplasm
- where is it?
- found in which bugs?
- space btwn cytoplasmic membrane & outer membrane in gram (-) bugs.
- this is the location of beta-lactamases.
dipicolinic acid
-where is this found?
In a spore.
Capsule
-gram (+) or (-)?
Both can have it.
Peptidoglycan
-gram (+) or (-)?
Both
Which bugs are pleomorphic?
Rickettsia & chlamydia.
Which bug has no cell wall?
mycoplasma
Chlamydia
-what does it lack in its cell wall?
muramic acid
Mucicarmine
-helps visualize what?
Capsule
India ink/mucicarmine stain shows bug
-think what?
Cryptococcus neoformans
Chocolate agar with factors V (NAD+) and X (hematin)
-which bug?
H. influenzae
Thayer-Martin
-whats in it?
VPN media
- Vancomycin (inhibits gram-positive organisms)
- Polymyxin (inhibits gram-negative organisms except Neisseria)
- Nystatin (inhibits fungi)
*“to connect to Neisseria, please use your VPN client”
Bordet-Gengou (potato) agar
-which bug?
Bordetella pertussis
Regan-Lowe medium
-which bug?
Bordetella pertussis
Tellurite agar, Löffler medium
-which bug?
C. diphtheriae
Löwenstein-Jensen agar
-which bug?
M. tuberculosis
Eaton agar, requires cholesterol
-which bug?
M. pneumoniae
Pink colonies on MacConkey agar
-which type of bugs?
Lactose-fermenting enterics
How does E. coli look on EMB agar?
-colonies with green metallic sheen
Charcoal yeast extract agar buffered with cysteine & iron
-which bug?
Legionella
Sabouraud agar
-which bug?
Fungi
*“Sab’s a fun guy!”
Obligate aerobes
- name them:
- mnemonic:
Nocardia, Pseudomonas, & MycoBacterium tuberculosis.
*Nagging Pests Must Breathe.
Obligate anaerobes
- name them:
- mnemonic:
Clostridium, Bacteroides, and Actinomyces
*Can’t Breathe Air.
Obligate anaerobes
- which enzymes do they lack?
- unique characteristics?
- catalase &/or superoxide dismutase
- Generally foul smelling (short-chain fatty acids), are difficult to culture, and produce gas in tissue (CO2 &H2).
Which type of ABx is useless against anaerobes bc it req O2 to enter bacterial cell?
aminoglycosides
Obligate intracellular
- which bugs?
- mnemonic:
Rickettsia, Chlamydia, Coxiella burnetti.
*Stay inside (cells) when it is Really Cold.
Encapsulated bacteria
- name them
- mnemonic
SHiNE SKiS.
- Strep pneumoniae
- H. influenzae type B
- N. meningitidis
- E. coli
- Salmonella
- Klebsiella pneumoniae
- group B Strep
Vaccine for encapsulated bugs
-must include what?
-Capsule + protein conjugate serves as an antigen in vaccines.
Aplenic pt
-give them which vaccines?
Give S. pneumoniae, H. influenzae, N. meningitidis vaccines.
Catalase-positive organisms
- name them
- mnemonic:
You need PLACESS for your cats.
Pseudomonas, Listeria, Aspergillus, Candida, E. coli, S. aureus, Serratia.
Why conjugate a capsular antigen w/a protein?
-A polysacc. Ag alone cannot be presented to T cells.
-Conjugating it w/a protein enhances immunogenicity by
promoting T-cell activation and subsequent class switching.
Pneumococcal vaccine
- which vaccine = conjugated to protein
- which vaccine is not?
-PCV (pneumococcal conjugate vaccine, i.e., Prevnar)
-PPSV (pneumococcal polysaccharide vaccine with
no conjugated protein, i.e., Pneumovax)
Name the conjugate vaccines:
- PCV (pneumococcal conjugate vaccine)
- H. influenzae type B (conjugate vaccine)
- Meningococcal vaccine (conjugate vaccine)
Urease-positive bugs
- name them
- mnemonic:
CHuck Norris hates PUNKSS.
- Cryptococcus
- H. pylori
- Proteus
- Ureaplasma
- Nocardia
- Klebsiella
- S. epidermidis
- S. saprophyticus.
Protein A
- whats it do?
- which bug is it found in?
- Binds Fc region of IgG. Prevents opsonization and phagocytosis.
- Expressed by S. aureus.
Which bugs secrete IgA protease?
-mnemonic?
SHiN
-S. pneumoniae, H. influenzae type B, and Neisseria
M protein
- whats it do?
- which bug is it found in?
- Helps prevent phagocytosis.
- Expressed by group A streptococci.
Exotoxin
-coded by?
Plasmid or bacteriophage
Endotoxin
-coded by?
Bacterial chromosome
Exotoxin vs endotoxin
-which one more toxic?
Exotoxin much more toxic.
Exotoxin vs endotoxin
-which one is antigenic?
- Exotoxin = antigenic, induces high-titer antibodies called antitoxins.
- Endotoxin = poorly antigenic
Exotoxin vs endotoxin
-vaccine available?
- Exotoxin: Toxoids used as vaccines.
- Endotoxin: No toxoids formed and no vaccine available
toxoid
-define:
Exotoxin thats been partially denatured by formalin, acid, or heat.
Exotoxin vs endotoxin
-heat stability:
- exotoxin: Destroyed rapidly at 60°C=140F (except staphylococcal enterotoxin).
- endotoxin: Stable at 100°C=212F(=BP of water) for 1 hr.
A-B exotoxin
- function of A subunit?
- function of B subunit?
- A subunit = active subunit w/toxin activity
- B subunit = binds to host, involved w/entry.
Which bugs’ toxin:
-Inactivate elongation factor (EF-2).
- C. diphtheriae = Diphtheria toxin
- Pseudomonas = Exotoxin A
*both = ADP ribosylating A-B toxins.
Which bugs’ toxin:
-Inactivate 60S ribosome by removing adenine from rRNA.
- Shigella = shigatoxin
- EHEC (including O157:H7) = shiga-like toxin
*both = ADP ribosylating A-B toxins.
Shiga toxin
-what can it cause?
-dysentery & HUS.
Shigella vs EHEC
-difference?
EHEC does not invade host cells.
Shiga-like toxin
-what can it cause?
HUS
EHEC: shiga like toxin
-targets which types of cells?
EHEC frequently causes HUS b/c the toxin targets
colonic mucosal cells AND renal endothelial cells
Which bugs make toxins that cause inc. fluid secretion?
ETEC, cholera, Bacillus anthracis.
ETEC:
-what are its 2 toxins & what do they do?
1) LT (heat-labile toxin) = inc. cAMP = Cl secretion into gut & water follows = diarrhea.
2) ST (heat-stabile toxin) = inc. cGMP = dec. NaCl & H2O resorption in gut = diarrhea.
ETEC: 2 toxins
-mnemonic:
Watery diarrhea:
-Labile in the Air (Adenylate cyclase), Stable on the Ground (Guanylate cyclase).
Bacillus anthracis
- whats its toxin that causes fluid secretion?
- hows it work?
Edema factor = mimics cAMP = Likely responsible for characteristic edematous borders of black eschar in cutaneous anthrax.
Vibrio cholerae
- toxin?
- mech?
Cholera toxin = permanently activates Gs = inc. cAMP = inc Cl secretion into the gut = diarrhea.
*Voluminous “rice-water” diarrhea.
Bordetella pertussis
- whats its toxin?
- whats it do?
Pertussis toxin = disabled Gi = inc. cAMP = impairs phagocytosis to permit survival of microbe.
-Whooping cough: the toxin may not be the cause of the cough.
Bordetella pertussis
- what are the 3 stages?
- in which one is pt most contagious?
- in which stage are the “whoops”.
1) Catarrhal = most contagious.
2) Paroxysmal = whooping cough
3) Convalescent stage
Bordetella pertussis
- where does it infect?
- does it cause productive or non-productive cough?
- Invades resp. tract & attaches (via filamentous hemagluttinin) to ciliated epithelium of trachea/bronchi.
- Evades immune response and destroys the ciliated cells causing whooping cough.
- non-productive cough bc cilia is destroyed.
Does bordetella pertussis invade the body?
No.
- It attaches to ciliated epithelial cells of the bronchi and then releases its exotoxins.
- The FHA, a pili rod extending from its surface, is involved in this binding. Antibodies directed against the FHA prevent binding and disease, and thus they are protective.
Bordetella pertussis
-how does it damage the ciliated cells?
Tracheal cytotoxin: This toxin destroys the ciliated epithelial cells, resulting in impaired clearance of bacteria, mucus, and inflammatory exudate. This toxin is probably responsible for the violent cough.
Which bugs have exotoxins that inhibit release of NTs?
C. tetani & C. botulinum.
C. tetani & C. botulinum
- which one causes flaccid paralysis?
- which one causes spastic paralysis?
- Tetani = spastic
- Botulinum = flaccid
*if botox was spastic, it would be against the point cuz then you’d get wrinkles. Whole point is to make the muscle remain flaccid.
Presentation of botulinum poisoning?
- Initially = diplopia & dysphagia.
- Followed by general muscle weakness, which rapidly leads to sudden respiratory paralysis and death.
Which bugs have exotoxins that lyse cell membranes?
-what are their toxins called?
- C. perfringens = Alpha toxin = Phospholipase(lecithinase)
- S. pyogenes = Streptolysin O = lyses RBCs
What will WBC count look like in pertussis infection?
It will look like a viral infection = more lymphocytes than neutros.
Which bugs have superantigens that can cause shock?
-name the toxins:
- S. aureus = Toxic shock syndrome toxin (TSST-1)
- S. pyogenes = Exotoxin A
How do superantigens work?
-what chemicals do they cause to be released?
-Bring MHC II and TCR in proximity to outside of antigen binding site to cause overwhelming release of IFN-γ and IL-2 => shock.
Toxic shock syndrome:
-Sxs:
Fever, rash, shock.
How does endotoxin lead to DIC?
-activates what mediator?
Activates tissue factor
Tissue factor
- aka?
- which coag. pathway does it activate?
- aka thromboplastin
- Extrinsic pathway.
Which bugs use transformation more than most?
- mnemonic:
- what else do these bugs have in common?
SHiN
- S. pneumoniae
- H. influenzae type B
- Neisseria
*these all have IgA protease.
Bacterial Conjugation: F+ × F–
- whats transferred?
- are chromosomal genes transferred?
- is plasmid transferred?
- plasmid is replicated and transferred.
- no chromosomal genes are transferred.
*key = plasmid is replicated first, so after conjugation, both bugs are F+.
If F+ plasmid is incorporated into bacterial chromosomal DNA, what do you call it?
-termed high-frequency recombination (Hfr) cell.
Bacterial Conjugation: Hfr × F–
- whats transferred?
- are chromosomal genes transferred?
- is plasmid transferred?
- Replication of incorporated plasmid DNA may include some flanking chromosomal DNA.
- Transfer of plasmid and chromosomal genes.
Transposition
-how can this lead to ABx resistance spread?
- Segment of DNA (transposon) that can “jump” (excision and reintegration) from one location to another, can transfer genes from plasmid to chromosome and vice versa.
- When excision occurs, may include some flanking chromosomal DNA, which can be incorporated into a plasmid and transferred to another bacterium.
- Examples include antibiotic resistance genes on R plasmid.
Genes for the following 5 bacterial toxins are encoded in a lysogenic phage:
-mnemonic:
ABCDE
- ShigA-like toxin
- Botulinum toxin (certain strains)
- Cholera toxin
- Diphtheria toxin
- Erythrogenic toxin of S. pyogenes (scarlet fever)
Gram (+) rods
- name them
- mnemonic:
from CC to MLB - Grant uses a rod (baseball bat).
- Clostridium (anaerobe)
- Corynebacterium
- Listeria
- Bacillus (aerobe)
- Mycobacterium
Bile soluble
-does it survive in bile?
No
-its lysed in bile.
Which bug grows in 6.5% NaCl?
Enterococcus
α-hemolytic bacteria
-what color ring in blood agar?
green
β-hemolytic bacteria
-what color ring in blood agar?
clear area
Coagulase
- how does it cause coagulation?
- what does coagulase allow the bug to do?
- Activates prothrombin.
- form a fibrin clot around itself => abscess.
S. Aureus
-commonly colonizes where?
Nose