Proteins Flashcards
What are proteins?
= polymers made from amino acid monomers
= condensation polymer
= forms water from an OH and a hydrogen- condensation
= water is added- hydrolosis
What is the bond between amino acids called?
= peptide bonds
How to find the amino acid monomers the proteins are made from?
= remove peptide bond, add OH or a hydrogen
What is the primary structure?
= specific sequence of amino acids in a polypeptide chain
What is the secondary structure?
= hydrogen bonds exist between peptide links, causes polypeptide chain to either:
= fold into beta pleated sheets
= coil into alpha helixes
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What is the teritary structure?
= protein chain is long
= continuation of folding and coiling, 3 dimensional structure of the protein
What do proteins have?
= specific shape
= held together by hydrogen bonding and disulfide bridges
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how are disulfide brigges formed?
= -SH group
= lose a hydrogen
= and sulfur atoms can bond forming a disulphide S-S bond
What is hydrogen bonding?
= partial positives hydrogens are attracted to the lone pair of electrons in a partial negative oxygen, intermolecular force
What does PH and temperature do?
= change the shape of the protein by breaking the bonds
What are enymes?
= proteins
= biological catalysts- speed up chemical reactions without being used up
= suvstrates interact with enzymes to speed up chemical reactions
= has a 3d active site, teritary protein structure, substrates can interact to form a complex
= specific to only one type of substrate and the shape is fixed
What kind of carbon do enzymes have and why?
= enzymes have a chiral carbon, due to the amino acids
= only one enatoimer in the substrate will fit into the active site, this means enzymes are stereospecific
What are inhibtitors?
= rate of reaction can be slowed down using inhibitors to block the active site from the substrate
= similar shape to the substrate, that can form enzyme-substrate complex
= more inhibitors= more blocked active sites so lower rate of reaction
= another factor is how strongly the inhibitoe binds
How do antibiotics work?
= these work like inhibitors
= blocking active site of enzyme, that is responsible of making the cell wall, the bacteria burtss and dies therefore
= as active sites are sterospecific it is difficult to find drugs that will fit in the active site, as if there is a chiral carbon, then only one enatoimer works
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