Micro FA Clinical bacteriology pg 134-150 Flashcards
Staphylococci novobiocin test
Novobiocin—Saprophyticus is Resistant; Epidermidis is Sensitive.
On the office’s “staph” retreat, there was no stress.
Streptococci optochin/bacitracin test
Optochin—Viridans is Resistant; Pneumoniae is Sensitive.
OVRPS (overpass).
Bacitracin—group B strep are Resistant; group A strep are Sensitive.
B-BRAS.
α-hemolytic bacteria
Partial reduction of hemoglobin causes greenish or brownish color without clearing around growth on blood agar A. Include the following organisms:
Streptococcus pneumoniae (catalase ⊝ and optochin sensitive)
Viridans streptococci (catalase ⊝ and optochin resistant)
β-hemolytic bacteria
Complete lysis of RBCs –> pale/clear area surrounding colony on blood agar A.
Include the following organisms:
Staphylococcus aureus (catalase and coagulase ⊕)
- Listeria & E. Coli
Streptococcus pyogenes—group A strep (catalase ⊝ and bacitracin sensitive)
Streptococcus agalactiae—group B strep (catalase ⊝ and bacitracin resistant)
Virulence factor of S. aureus, fxn?
Protein A (virulence factor) binds Fc-IgG, inhibiting complement activation and phagocytosis.
Where does S. aureus colonize?
Commonly colonizes the nares, ears, axilla, and groin.
Inflammatory disease manifestations of S. aureus?
skin infections, organ abscesses, pneumonia (often after influenza virus infection), endocarditis, septic arthritis, and osteomyelitis.
How does MRSA resistance occur?
resistance due to altered penicillin-binding protein. mecA gene from staphylococcal chromosomal cassette involved in penicillin resistance
Staphylococcal toxic shock syndrome (TSS)
fever, vomiting, rash, desquamation, shock, end-organ failure. TSS results in INC AST, INC ALT, Inc bilirubin. Associated with prolonged use of vaginal tampons or nasal packing.
S. aureus food poisoning - how does it happen? sx?
S aureus food poisoning due to ingestion of preformed toxin –> short incubation period (2–6 hr) followed by nonbloody diarrhea and emesis. Enterotoxin is heat stable –> not destroyed by cooking.
How does s. aureus lead to abscess formation?
S aureus makes coagulase and toxins. Forms fibrin clot around itself –> abscess
S. epidermidis - colonizes what?
Normal flora of skin; contaminates blood cultures.
How does S. epidermidis lead to infections of prosthetic devices and IV catheters?
by producing adherent biofilms
Characteristics of S.epidermidis
Gram ⊕, catalase ⊕, coagulase ⊝, urease ⊕ cocci in clusters. Novobiocin sensitive. Does not ferment mannitol (vs S aureus).
Characterics of S. aureus?
Gram ⊕, β-hemolytic, catalase ⊕, coagulase ⊕ cocci in clusters
ferments mannitol on salt agar (halophilic)
S. saprophyticus characteristics
Gram ⊕, catalase ⊕, coagulase ⊝, urease ⊕ cocci in clusters. Novobiocin resistant.
Characteristics of S. pneumo?
Gram ⊕, α-hemolytic, lancet-shaped diplococci A. Encapsulated. IgA protease. Optochin sensitive
S. pneumo most commonly causes?
Meningitis Otitis media (in children) Pneumonia Sinusitis
What provides the virulence for S. pneumo?
capsule
Pneumococcus is associated with:
“rusty” sputum, sepsis in patients with sickle cell disease, and asplenic patients
Characteristics of viridans group
Gram ⊕, α-hemolytic cocci. Resistant to optochin, differentiating them from S pneumoniae which is α-hemolytic but optochin sensitive. Normal flora of the oropharynx
Streptococcus mutans and S mitis cause ____ _____
Streptococcus mutans and S mitis cause dental caries.
S sanguinis makes ____ that bind to ______ ______ on damaged heart valves, causing _______ ________ _________
S sanguinis makes dextrans that bind to fibrin platelet aggregates on damaged heart valves, causing subacute bacterial endocarditis.
S. pyogenes characteristics
Bacitracin sensitive, β-hemolytic, pyrrolidonyl arylamidase (PYR) ⊕.
Diseases causes by S. pyogenes?
Pyogenic—pharyngitis, cellulitis, impetigo (“honey-crusted” lesions), erysipelas
Toxigenic—scarlet fever, toxic shock–like syndrome, necrotizing fasciitis
Immunologic—rheumatic fever, glomerulonephritis
virulence factor of S. pyogenes
Hyaluronic acid capsule and M protein of s.pyogenes inhibit phagocytosis.
How to test for recent S pyogenes infection?
ASO titer or anti-DNase B antibodies
Which strains of S. pyogenes cause rheu fever/ GN?
Strains causing impetigo can induce glomerulonephritis.
“Ph”yogenes pharyngitis can result in rheumatic “phever” and glomerulonephritis.
Sx of Scarlet fever?
blanching, sandpaper-like body rash, strawberry tongue, and circumoral pallor in the setting of group A streptococcal pharyngitis (erythrogenic toxin ⊕).
S. agalacticae characteristics?
Gram ⊕ cocci, bacitracin resistant, β-hemolytic, colonizes vagina;
What does S. agalactiae cause?
causes pneumonia, meningitis, and sepsis
Tests for S. agalactiae?
Hippurate test ⊕. PYR ⊝ CAMP (+)
When do we screen pregnant women for S. agal?
Screen pregnant women at 35–37 weeks of gestation with rectal and vaginal swabs. Patients with ⊕ culture receive intrapartum penicillin prophylaxis.
Streptococcus bovis - characteristics and diseases?
Gram ⊕ cocci, colonizes the gut. S gallolyticus (S bovis biotype 1) can cause bacteremia and subacute endocarditis and is associated with colon cancer.
Characteristics of Enterococci?
Catalase ⊝, PYR ⊕, variable hemolysis. G + cocci
grows in 6.5% NaCl
Enterococci - NF of? Diseases caused by?
Enterococci (E faecalis and E faecium) are normal colonic flora that are penicillin G resistant and cause UTI, biliary tract infections, and subacute endocarditis (following GI/GU procedures).
Do enterococci or streptococci bovis grow in Nacl/bile?
Enterococci are more resilient than streptococci, can grow in 6.5% NaCl and bile (lab test).
B. anthracis characteristics?
Gram ⊕, spore-forming rod, Has a polypeptide capsule (poly d-glutamate)
How do anthrax colonies look?
Colonies show a halo of projections, sometimes referred to as “medusa head” appearance.
3 parts of anthrax toxin?
(an exotoxin consisting of protective antigen, lethal factor, and edema factor
Sx of pulm anthrax?
most commonly from contaminated animals or animal products, although also a potential bioweapon –> flu-like symptoms that rapidly progress to fever, pulmonary hemorrhage, mediastinitis, and shock.
CXR may show widened mediastinum.
B. cereus - what type of food? why?
Spores survive cooking rice (reheated rice syndrome). Keeping rice warm results in germination of spores and enterotoxin formation
sx of B. cereus
Emetic type usually seen with rice and pasta. Nausea and vomiting within 1–5 hr. Caused by cereulide, a preformed toxin.
Diarrheal type causes watery, nonbloody diarrhea and GI pain within 8–18 hr.
Characteristics of Clostridia?
Gram ⊕, spore-forming, obligate anaerobic rods.
C. tetani - what toxin? moa?
Produces tetanospasmin, an exotoxin causing tetanus. Tetanospasmin blocks release of GABA and glycine from Renshaw cells in spinal cord.
Sx of C. tetani?
spastic paralysis, trismus (lockjaw), risus sardonicus (raised eyebrows and open grin), opisthotonos (spasms of spinal extensors).
Prevention and treatment for Tetanus?
Prevent with tetanus vaccine. Treat with antitoxin +/− vaccine booster, antibiotics, diazepam (for muscle spasms), and wound debridement.
C. botulinum - toxin? mech?
Produces a heat-labile toxin that inhibits ACh release at the neuromuscular junction, causing botulism.
What leads to botulism in adults and children?
. In adults, disease is caused by ingestion of preformed toxin. In babies, ingestion of spores (eg, in honey) leads to disease (floppy baby syndrome).
Sx of botulism and Tx?
Symptoms of botulism (the 4 D’s): Diplopia, Dysarthria, Dysphagia, Dyspnea
Treat with human botulinum immunoglobulin.
Where is botulism found?
Botulinum is from bad bottles of food, juice, and honey (causes a descending flaccid paralysis).
Local botox injections is used for?
Local botox injections used to treat focal dystonia, achalasia, and muscle spasms. Also used for cosmetic reduction of facial wrinkles.
C. perfringens - toxin? MoA?
Produces α-toxin (lecithinase, a phospholipase) that can cause myonecrosis (gas gangrene A; presents as soft tissue crepitus) and hemolysis
How can C. perfringens lead to food poisoning?
If heavily spore-contaminated food is cooked but left standing too long at < 60°C, spores germinate –> vegetative bacteria –> produce heat-labile enterotoxin –> food poisoning symptoms in 10-12 hours, resolution in 24 hours.
C. diff - toxin? MoA?
Produces 2 toxins. Toxin A, an enterotoxin, binds to brush border of gut and alters fluid secretion. Toxin B, a cytotoxin, disrupts cytoskeleton via actin depolymerization. Both toxins lead to diarrhea –> pseudomembranous colitis
C. Diff infection usually follows admin of meds?
Often 2° to antibiotic use, especially clindamycin or ampicillin; associated with PPIs.
Complication of C. diff?
toxic megacolon
Tx of C. diff?
oral vancomycin, metronidazole, or fidaxomicin
C. diphtheriae characteristics
Gram ⊕ rods occurring in angular arrangements
Exotoxin of C. diphteriae
Causes diphtheria via exotoxin encoded by β-prophage. Potent exotoxin inhibits protein synthesis via ADP-ribosylation of EF-2, leading to possible necrosis in pharynx, cardiac, and CNS tissue.
Sx of C. diphtheriae
pseudomembranous pharyngitis (grayish-white membrane A) with lymphadenopathy, myocarditis, and arrhythmias.
Dx of C. diphtheriae
gram ⊕ rods with metachromatic (blue and red) granules and ⊕ Elek test for toxin.
What does C. diptheriae look like? which stain?
Cornye = club shaped (metachromatic granules on Löffler media). Black colonies on cystine-tellurite agar.
L. monocytogenes characteristics
Gram ⊕, facultative intracellular rod
Where do we acquire Listeria from?
acquired by ingestion of unpasteurized dairy products and cold deli meats, transplacental transmission, by vaginal transmission during birth
Why does refrigeration of meats not stop Listeria infection?
Listeria grows well at refrigeration temperatures (4°–10°C; “cold enrichment”).
How does Listeria avoid antibodies?
Forms “rocket tails” (red in A) via actin polymerization that allow intracellular movement and cell to cell spread across cell membranes, thereby avoiding antibody. Characteristic tumbling motility in broth.
Diseases caused by Listeria?
amnionitis, septicemia, and spontaneous abortion in pregnant women;
granulomatosis infantiseptica;
neonatal meningitis;
meningitis in immunocompromised patients;
mild, selflimited gastroenteritis in healthy individuals.
Tx of Listeria?
Ampicillin
Where is Nocardia and Actinomyces found normally?
Nocardia - Found in soil
Actinomyces - Normal oral, reproductive, and GI flora
Sx of Nocardia?
Causes pulmonary infections in immunocompromised (can mimic TB but with a neg PPD)
cutaneous infections after trauma in immunocompetent, can spread to CNS
Sx of Actinomyces
Causes oral/facial abscesses that drain through sinus tracts; often associated with dental caries/ extraction and other maxillofacial trauma; forms yellow “sulfur granules”; can also cause PID with IUDs
Rx for Nocardia/Actinomyces?
Treatment is a SNAP: Sulfonamides—Nocardia; Actinomyces—Penicillin
Mycobacteria - causes what?
Mycobacterium tuberculosis (TB, often resistant to multiple drugs).
M avium–intracellulare (causes disseminated, non-TB disease in AIDS; often resistant to multiple drugs). Prophylaxis with azithromycin when CD4+ count < 50 cells/ mm3.
M scrofulaceum (cervical lymphadenitis in children).
M marinum (hand infection in aquarium handlers).
Virulence factors of mycobacteria
Cord factor creates a “serpentine cord” appearance in virulent M tuberculosis strains; activates macrophages (promoting granuloma formation) and i_nduces release of TNF-α._
Sulfatides (surface glycolipids) inhibit phagolysosomal fusion.
TB sx?
fever, night sweats, weight loss, cough (nonproductive or productive), hemoptysis.
PPD test of TB?
PPD ⊕ if current infection or past exposure. PPD ⊝ if no infection and in sarcoidosis or HIV infection (especially with low CD4+ cell count).
Sign of secondary TB?
Caseating granulomas with central necrosis and Langhans giant cell
How to Dx Leprosy?
via skin biopsy or tissue PCR
Reservoir of leprosy in US?
armadillos
T or F Mycobacterium leprae cannot be grown in vitro?
True.
Sx of mycobacteria leprae - 2 forms?
Lepromatous—presents diffusely over the skin, with Leonine (Lion-like) facies B, and is communicable (high bacterial load); characterized by low cell-mediated immunity with a largely Th2 response. Lepromatous form can be Lethal.
Tuberculoid—limited to a few hypoesthetic, hairless skin plaques; characterized by high cellmediated immunity with a largely Th1-type immune response and low bacterial load.
Tx of Leprosy?
dapsone and rifampin for tuberculoid form; clofazimine is added for lepromatous form