Enzymes Flashcards
Reversibly inhibits IMP dehydrogenase
Mycophenolate Mofetil
Ribavirin
inhibits dihydroorotate
dehydrogenase
Leflunomide
inhibit dihydrofolate
reductase
Methotrexate (MTX), trimethoprim (TMP),
and pyrimethamine:
inhibits
thymidylate synthase
5-fl orouracil (5-FU) and its prodrug
capecitabine: form 5-F-dUMP, which inhibits
thymidylate synthase
inhibit inosine
monophosphate dehydrogenase - use?
Mycophenolate - used for lupus nephritis
Ribavirin - Hep C
inhibits ribonucleotide
reductase - use? SE/
Hydroxyurea
Use - SCD, Myeloproliferative disorders (PCV, CML)
SE - megaloblastic anemia,
Location and use of CPS I v CPS II
CPS 1 - mitochondria
CO2 + NH3 + ATP –> Carbamoyl PO4
Urea cycle 1st step
CPS 2 - cytosol
Glutamine + CO2 + ATP –> Carbamoyl PO4 in pyrimidine base production
Adenosine Deaminase def - Dz, MoI?
SCID - AR
HGPRT def
Lesch Nyhan -
Hyperuricemia Gout Pissed off (aggression, self-mutilation) Retardation (intellectual disability) DysTonia
DNA Helicase
Bloom Syndrome
inhibits RNA polymerase II. Causes severe hepatotoxicity if ingested
α-amanitin, found in Amanita phalloides (death cap mushrooms
inhibits RNA polymerase in both prokaryotes and eukaryotes.
Actinomycin D,
inhibits DNA-dependent RNA polymerase in prokaryotes.
Rifampin
N-acetylglucosaminyl-1-phosphotransferase
I-cell disease (inclusion cell disease/mucolipidosis type II)—inherited lysosomal storage disorder
coarse facial features, gingival hyperplasia, clouded corneas, restricted joint movements, claw hand deformities, kyphoscoliosis, and high plasma levels of lysosomal enzymes. O
myotonin protein kinase
Myotonic dystrophy
Cofactor of transketolase, which pathway?
B1
HMP shunt
Cofactor in ALT/AST
B6
Why alcoholics may not have inc LFTs
3 rxns that need B7 as cofactor
Pyruvate carboxylase: pyruvate (3C)
–> oxaloacetate (4C)
Acetyl-CoA carboxylase: acetyl-CoA (2C)
–> malonyl-CoA (3C)
Propionyl-CoA carboxylase: propionyl-CoA
(3C) –> methylmalonyl-CoA (4C)
cofactor for dopamine
β-hydroxylase
Vitamin C
(+)’d by epoxide reductase
Vitamin K
(-) alcohol DH
Fomepizole
blocks acetaldehyde dehydrogenase
Disulfiram
Neurologic defects, lactic acidosis, inc serum alanine starting in infancy
Pyr DH complex def
most common human enzyme deficiency
G6PD def
MoI of G6PD def
XLR
fructokinase sx
fructose appears in blood and urine.
hypoglycemia, jaundice, cirrhosis, vomiting.
aldolase B
isolated infantile cataracts.
galactokinase def
galactose-1-phosphate uridyltransferase
Damage is caused by accumulation of toxic substances (including galactitol, which accumulates in the lens of the eye).
Symptoms develop when infant begins feeding (lactose present in breast milk and routine formula) and include failure to thrive, jaundice, hepatomegaly, infantile cataracts, intellectual disability
+ kidney sx - amino aciduria, hyperchloremic metabolic acidosis
aldose reductase located where?
Lens has primarily aldose reductase. Retina, Kidneys, and Schwann cells have only aldose reductase
Which organs have both aldose reductase and sorbitol DH?
Liver, Ovaries, seminal vesicles
Cofactor for aldose reductase / sorbitol DH?
a) NADPH
b) NAD+
Ornithine transcarbamylase deficiency - MoI, sx
inc orotic acid in blood and urine, dec BUN, symptoms of hyperammonemia
Homogentisate oxidase
Alkaptonuria
Autosomal recessive. Usually benign.
Findings: bluish-black connective tissue, ear cartilage, and sclerae (ochronosis); urine turns black on prolonged exposure to air. May have debilitating arthralgias (homogentisic acid toxic to cartilage).
Tyrosinase
Albinism
Phenylalanine hydroxylase
PKU
branched-chain α-ketoacid dehydrogenase
Maple syrup urine disease
vomiting, poor feeding, urine smells like maple syrup/burnt sugar. Causes severe CNS defects, intellectual disability, death.
propionylCoA carboxylase - sx?
Propionic acidemia
poor feeding, vomiting, hypotonia, anion gap metabolic acidosis, hepatomegaly, seizures.
Glucose 6 Phosphatase - sx?
Von Gierke
Severe fasting hypoglycemia, –> inc Glycogen in liver and kidneys, inc blood lactate, triglycerides, uric acid (Gout), and hepatomegaly, renomegaly.
amino acid competes for same transporter as glucose, hence the inc in uric acid.
Lysosomal acid α-1,4glucosidase - dz?
Pompe
Cardiomegaly, hypertrophic cardiomyopathy, hypotonia, exercise intolerance
α-1,6-glucosidase
Cori disease (type III)
Skeletal muscle glycogen phosphorylase
McArdle disease (type V)
HeXosaminidase A
Tay-Sachs disease
α-galactosidase A
Fabry disease
Arylsulfatase A
Metachromatic leukodystrophy
Galactocerebrosidase (galactosylceramidase)
Krabbe disease
Glucocerebrosidase (β-glucosidase)
Gaucher disease
Sphingomyelinase
Niemann Pick disease
α-l-iduronidase
Hurler
Iduronate-2-sulfatase
Hunter syndrome
Medium-chain acyl-CoA dehydrogenase deficiency
— ability to break down fatty acids into acetyl-CoA –> accumulation of fatty acyl carnitines in the blood with hypoketotic hypoglycemia. Causes vomiting, lethargy, seizures, coma, liver dysfunction, hyperammonemia.
HMG-CoA synthase and lyase
ketone production
HMG-CoA reductase
chol synthesis
Lipoprotein lipase Cofactor
C-II
Activates LCAT
A-I
Hepatic lipase
Degrades TGs remaining in IDL
Hormone-sensitive lipase
Degrades TGs stored in adipocytes.
PCSK9 fxn?
drug that targets it?
degrades LDL receptor
Alirocumab,
evolocumab
Lipoprotein lipase or apolipoprotein C-II deficiency - sx?
Type I dyslipidemia - Hyperchylomicronemia
Pancreatitis, hepatosplenomegaly, and eruptive/pruritic xanthomas
Defect of NADPH oxidase
how to test for it?
Chronic granulomatous disease
Abnormal dihydrorhodamine (flow cytometry) test ( dec green fluorescence). Nitroblue tetrazolium dye reduction test (obsolete) fails to turn blue.
no blue, no green for CGD
reversibly (-) IMP DH - use? SE/
Mycophenolate
Mofetil
use - lupus nephritis
SE/ GI upset, pancytopenia,hypertension,
hyperglycemia.
Associated with invasive CMV infection.
Urease + organisms
predisposes you to what type of stones
Proteus, Cryptococcus, H pylori, Ureaplasma,
Nocardia, Klebsiella, S epidermidis,
S saprophyticus.
struvite stones (ammonium magnesium phosphate)
Patients with NADPH def have susceptibility to ________ positive organisms
List them
Catalase +
G+ = Nocardia, Listeria, Staphylococci,
G- = Pseudomonas, E coli,
Serratia, B cepacia, H pylori.
Fungi = Aspergillus, Candida,
IgA protease secreted by ?
S pneumoniae, H influenzae type b, and Neisseria (SHiN).
Adding deoxyribonuclease degrades naked
DNA, preventing ______ (this bacterial process)
Transformation
List 3 bacterial toxins that overactivate adenylate cyclase
ETEC heat labile toxin Cholera toxin (by (-) Gi) Bordetella pertussis (disable Gi)
Bact toxin that mimics adenylate cyclase
Bacillus anthracis
In an AB toxin, the active a component is usually
an ___ _________
ADP ribosyltransferases
bacterial toxin that is a lecithinase/phopholipase
Clostridium perfringens alpha toxin
Which staphylococci are coagulase + vs -
+ = S. aureus
- = S. saprophyticus, S. epidermidis
Which G- diplococci produces maltose acid?
N. meningiditis
N. gon and Moraxella are neg for maltose acide
Which G- bacilli ferment lactose
Fast - E. coli, Klebsiella, Enterobacter
Slow - Citrobacter, Serratia
Of the bacilli non lactose fermenters, which
produces oxidase
Pseudomonas
Which G- bact produce Phospholipase C
Pseudomonas - breaks down cell membranes
Which microorganism leads to (-)’n of tyrosinase?
Tinea versicolor (hypo/hyperpigmentation)
Malassezia furfur
Naked nucleic acids of ⊝ strand ssRNA and dsRNA viruses are not infectious. They require ________contained in the complete virion.
polymerases
DNA virus with its own reverse transcriptase
Hepadna (Hep B)
-ssRNA virus that produces neuraminidase
Influenza (Orthomyxo)
Parainfluenza (Paramyxo) - croup
Antibiotics that binds transpeptidases
All Beta lactams - bind penicillin binding proteins (transpeptidases)
inhibitor of renal dehydropeptidase I, given with carbapenems
Cilastatin
Rx that Inhibit dihydropteroate synthase
Sulfonamides, Dapsone
Inhibit prokaryotic enzymes topoisomerase
II (DNA gyrase) and topoisomerase IV.
Flouroquinolones
Inhibit DNA-dependent RNA polymerase.
Rifampin, Rifabutin
Rx that dec carbohydrate polymerization of mycobacterium cell wall blocking arabinosyltransferase.
Ethambutol
Inhibits DNA and RNA biosynthesis by conversion to 5-fluorouracil by cytosine deaminase.
Flucytosine
Inhibits the fungal enzyme squalene epoxidase.
Terbinafin
Inhibit influenza neuraminidase
Oseltamivir, Zanamivir
Acyclovir, etc are monophosphorylated by ?
Monophosphorylated by HSV/VZV thymidine kinase and not phosphorylated
in uninfected cells –> few adverse effects.
Viral DNA/RNA polymerase inhibitor and
HIV reverse transcriptase inhibitor.
Foscarnet
inhibits viral DNA polymerase
Ganciclovir and Cidofovir
Pyruvate DH def leads to an increase of what in the blood?
lactic acid
serum alanine
Sofosbuvir and Dasabuvir work on what enzyme?
Inhibits NS5B, an RNA-dependent RNA
polymerase
Grazoprevir ,Simeprevir (-) what enzyme
Inhibits NS3/4A, a viral protease, preventing
viral replication.
Enzyme in the 3rd phase of wound healing - needs ______ to function
Collagenases - break down type III collagen, need zinc to function
Granulomas are associated with hypercalcemia bc of ?
Inc 1alpha hydroxylase mediate vitamin D activation in macrophages
In invasive carcinomas, cells have invaded basement membrane using
using collagenases and hydrolases (metalloproteinases)
cell-cell contacts lost by inactivation of E-cadherin
regenerates AchE
pralidoxime
Phentolamine is used to patients on _______ ______ who eat meat and cheese
MAO inhibitors