Life at a Cellular Level 2 Flashcards

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1
Q

What elements do we need large amounts of each day?

A
  • H2
  • C
  • N2
  • O2
  • Na
  • P
  • S
  • Cl2
  • K
  • Ca
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2
Q

What are the four lightest atoms?

A
  • Hydrogen
  • Oxygen
  • Nitrogen
  • Carbon
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3
Q

What kind of bonds can C form?

A
  • Single bonds (H)
  • Single and double bonds (O, N)
  • Single, double and triple bonds (C)
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4
Q

What defines biomolecular function?

A

-Functional groups of atoms that involve bonds between carbon and other groups of atoms

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5
Q

Why is the polarity of C bonds critical to functionality?

A
  • C-C and C-H are relatively stable as they share e equally

- C-O and C-N or C- functional group bonds are highly polar which alters the C bond reactivity

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6
Q

Configuration

A

The fixed arrangement of atoms in a molecule

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7
Q

What is function also dependent on?

A

The arrangement of groups on the molecule

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8
Q

How can molecules which contain C=C be arranged?

A

It is a rigid conformation so only 2 arrangements:

  • Cis
  • Trans
  • It is only possible to interconvert between the 2 by breaking and reforming bonds
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9
Q

C can act as a chiral centre. What are the two forms of chiral C?

A
  • Laevo (left handed)
  • Dextro (Right handed)
  • Only way to rotates is to break and reform bonds
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10
Q

What kind of amino acid are all proteins made from?

A

L-amino acids

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11
Q

Conformation

A

The precise arrangement of atoms in a molecule

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12
Q

What do bonds that can rotate allow?

A

Many different conformations which are inter-convertible without breaking and re-forming covalent bonds

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13
Q

What dictates how freely bonds can rotate?

A

Interactions of groups around the C-C bond

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14
Q

What are the 5 chemical reactions of life?

A
  • Redox reactions
  • Making and breaking C-C bonds
  • Internal rearrangements
  • Group transfers
  • Condensation and hydrolysis
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15
Q

What is oxidation?

A

Loss

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16
Q

What is reduction?

A

Gain

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17
Q

What usually occurs in biological redox reactions?

A

2 e’s (and 2 protons) are gained or lost

18
Q

What is an example of making/breaking C-C bonds.

A

Cleavage of glucose in the glycolysis pathway

19
Q

What is an example of internal rearrangements?

A

In glycolysis, before the sugar splits

20
Q

What is an example of a group transfer?

A

In glycolysis phosphate group is transferred

21
Q

What is an example of condensation/hydrolysis?

A

The sub-units of proteins, polysaccharides and nucleic acids are all joined by condensation and broken by hydrolysis reactions

22
Q

What are proteins?

A

Polymers of amino acid monomers linked by peptide bonds

23
Q

What are nucleic acids?

A

-Polymers of nucleotide monomers linked by 3’,5’-phosphodiester bonds

24
Q

What are the 2 types of nucleic acid?

A
  • Pyrimidines (flat single rings)-C,T,U

- Purines (flat, double rings)-A, G

25
Q

What allows DNA to form the double helix?

A

Flat planar structure of bases

26
Q

Describe the bonds between bases.

A
  • A to T= 2 bonds

- C to G= 3 bonds

27
Q

Describe the structure of RNA.

A

Single stranded

28
Q

What is retovir?

A

A nucleotide analogue

29
Q

What is Zidovudine?

A
  • Also known as AZT

- Is an analogue of the thymine nucleotide found in DNA

30
Q

What are polysaccharides?

A

Polymers of sugar monomers linked by glycosidic bonds

31
Q

What is D-glucose?

A
  • Monomer unit of starch and glycogen

- Reducing sugar

32
Q

Why is D-glucose termed a reducing sugar?

A
  • The linear form has an aldehyde group which can oxidised

- If this is oxidised then the other reactant would be reduced, so glucose is a reducing sugar

33
Q

How are glucose polymers formed?

A

By the condensation reaction between 2 glucose monomers

34
Q

How is a reducing end formed?

A
  • In glucose polymers, a monomer is linked to another which locks it in the cyclic form.
  • This continues until all the monomer are locked in cyclic from apart from the end monomer
35
Q

What do lipids usually contain?

A

One or more long chain fatty acids

36
Q

Why is oil a liquid?

A

It is unsaturated

37
Q

Why is lard solid?

A

It is almost exclusively saturated.

38
Q

Why is butter soft?

A

It is a mixture of saturated and unsaturated

39
Q

What are 2 classes of lipids?

A
  • Triacylglycerides

- Phospholipids

40
Q

Describe Triglycerides.

A
  • Storage lipids
  • Non-polar
  • 3 fatty acid chains linked to glycerol
41
Q

Why are phospholipids polar?

A

They have a head group attached to the glycerol