Infection Flashcards
What is gastro enteritis?
3+ loose stools/day
With accompanying features
What causes gastroenteritis?
Contamination of foodstuffs (eg chicken)
Poor storage (allowing proliferation of bacteria)
Travel related infections
Person-person spread - norovirus
What bacteria is the most common foodborne pathogen?
Campylobacter
Which bacteria causes the most hospital admissions for food poisoning?
Salmonella
Types od diarrheal illness
Non-inflammatory/secretory (cholera)
Inflammatory - shingella
Mixed (c.diff)
Describe secretory/non-inflammatory diarrhoea
Secretory toxin-mediated
I.E - cholera raises cAMP levels + cl secretion
Frequent watery stools - little abdominal pain
Rehydration for therapy
Describe inflammatory diarrhoea
Toxin damage causes inflammation + mucosal destruction
Causes pain + fever
Bacterial infection
Often rehydration sufficient. Sometimes antimicrobials
How long does gastroenteritis last?
Normally less than 2 weeks
Investigations into gastroenteritis
Stool culture Blood culture Renal function (dehydration) Blood count Abdominal xray if distended abdomen
What are the differentials of gastroenteritis?
inflammatory bowel disease
Spurious diahrroea
Carcinoma
Define campylobacter gastroenteritis
Up to 7 days incubation
Stools negative within 6 weeks
Severe abdominal pain
Very unlikely to be invasive (into blood <1%)
What can campylobacter gastroenteritis lead to?
Guillian barre syndrome
Reactive arthritis
Define salmonella gastroenteritis
Symptoms usually within 48 hours
Diahrroea lasts for less than 10 days
<5% invasive
20% still have positive stools 20 weeks later
Bacterial cultures - differences
Salmonella are lactose non-fermenters
Campylobacter needs specialised conditions
What are the most common salmonella strains in UK
Salmonella enteritidis
Salmonella typhimurium
Most are imported
What salmonella cause enteric fever?
Salmonella typhi
Salmonella paratyphi
Why strain of e.coli causes gastroenteritis?
E.coli O157
What is characterisitc of E.Coli O157 gastroenteritis?
Frequent bloody stools
Produces toxins which causes harmolytic-uraemic syndrome
E.Coli stays in blood, but toxin enters blood
Often from contminated meat or person to person spread
What is HUS? (haemolytic-ureamic syndrome)
Renal failure
Haemolytic anaemia
Thrombocytopenia
Through binding of globotriaosylceramide
What bacteria cause gastroenteritis outbreaks?
Staph A
Bacillus cereus (from refriend rice)
Clostridium perfringens
When are antibiotics indicated for gastroenteritis?
In immunocomprimised Severe sepsis/invasive infection Valvular heart disease Diabetes Chronic illness
How do you treat c.diff infection?
Metronidazole - First line, no severity markers
Oral vancomycin - 2+ severity markers
Fidaxomaicin
Stool transplants
How do you prevent C.diff
Avoid the 4 c antibiotics Isolate symotomatic patients Wash ahnds (not alcohol gel) between patients
What are the 4 antibiotics to avoid to prevent c.diff
Cephalosporins
Co-amoxiclav
Clindamycin
Clarithromycin
How do you request a parasite screen?
Parasites, cysts + ova
What are the common UK parasites?
Giardia lamblia
Cryptosporidium parvum
Describe Giardia lamblia
Found in contaminated water
Causes diarrhoea, malabsorption + failure to thrive
Cysts seen on stool micropsopy
Treat with metronidazole
Describe Cryptosporidium parvum
Found in contaminated water (animal faeces)
Cysts on micropscopy
No specific treatment required
What is entamoeba histolytica
Parasite causing amoebic dysentery Vegitive form in symptomatic patients - hot stools Cysts in asymptomatic patients May cause liver abscesses long term Treat with metronidazole
What is viral diarrhoea
Common in winter
Often rotaviruses
Sometimes adenoviruses
Common cause of outbreaks (hospital, community, cruise ships)
What are noraviruses
Small round structured viruses Diagnosed through PCR Very infectious Infect through airbourne particles Need strict infection control measures Ward closures common
What is SIRS?
Temperature change ->38 or <36 HR > 90 RR>20 or paCO2 <32 WBCs - >12000 or <4000
What is sepsis?
An infection of blood along with SIRS
What is the mortality with septic shock?
40%
What is qSOFA?
Hypotension - Systolic <100mmHg
Altered mental state
Tachypnea (Resp rate >22)
Score of 2 or more indicates high risk of poor outcome
What is Sepsis 6?
Blood cultures
|-> From two-three different sites, before antibiotics start
Blood lactate
Measure urine output
Oxygen
IV antibiotics
IV fluids
Why is lactate important in sepsis?
A marker of generalised hypoperfusion/severe sepsis/poor prognosis
Type A indicated Hypoperfusion
Type B - mitochondrial toxins, alcohol, malignancy, metabolism errors
When should you refer a septic patient to ITU?
Septic shock
Multi-organ failure
Needing sedation, intubation or ventilation
When should you refer a septic patient to HDU?
Low BP Lactate >2 despite resus Elevated creatinine Oliguria Liver dysfunction Bilateral infiltrates
What is a pyrexia of unkown origin?
No diagnosis after 3 outpatient visits
3 days in hospital
Or one week of outpatient investigation
What is a fabricated fever?
A real fever that is induced by patient ie inject self with foreign material (eg faeces)
Microbiology strongest clue
What is the difference between colonisation and infection?
Colonisation is presence on surfaces open to environment
Infection is presence inside the body that causes damage to body/tissues
Which bactera are spread through direct contact?
Staph A
Coliforms
Which bactera are spread through respiratory/droplets?
Neisseria meningitidis
Mycobacteria tuberculosis
Which bactera are spread through faecal oral?
Clostridium difficile
Salmonella
Which bactera are spread through Penetrating injury?
Group A streptococcus
Blood bourne viruses
What are the modes of HIV infection?
Sexual - mostly MSM in this country
Injecting drug users
Blood products
Organ transplant
What is the virology of HIV?
A type of retrovirus (lentivirus) that attaches to cells with CD4 on surface (lymphocytes) and other chemokine receptors
Uses reverse transcriptase to replicate
Uses integrase to integrate into host cell DNA
What is the main strain of HIV?
HIV-1 group M
What does an HIV infection do to the CD4 count?
Decreases it
What is the CD4 level for AIDS diagnostics?
Below 200
What are the most common (new) opportunistic infections in HIV?
Pneumocytis jiroveci pneumoia
Candidiasis
Mycobacterium avium complex
Cryptosporidious
What are the most common reactivation opportunistic infections in HIV?
Cerebral toxoplasmosis
TB
CMV disease
What is the natural history of HIV?
Acute infection (seroconversion) Asymptomatic HIV related illness AIDS-defining illness Death
What is a seroconversion illness?
When HIV antibodies first develop
Has abrupt onset 2-4 weeks post exposure
Self limiting - lasts 1-2 weeks
What are the symptoms for seroconversion illness
Flu-like illness Fever Malaise/lethargy Pharyngitis Lympjadenopathy Toxic exanthema
Looks like glandular fever but EBV not in keeping
How do you determine length of HIV infection?
If seroconversion illness, date of that
Else stored blood
Else most at risk
What are the respiratory AIDS-defining conditions?
TB
Pneumocystisis
What are neurology AIDS-defining conditions?
Cerebral toxoplasmosis
Primary cerebral lymphoma
Crytptococcal meningitis
Progressive multifocal leucoencephalopathy
What are the dermatology AIDS-defining conditions?
Kaposi’s sarcoma
What are the gastroenterology AIDS-defining conditions?
Persistant cryptosporidosis
What are the Oncology AIDS-defining conditions?
Non-hodgkin’s lymphoma
What are the Gynaecology AIDS-defining conditions?
Cervical cancer
What are the optholomology AIDS-defining conditions?
Cytomegavirus retinitis
How is HIV monitored?
CD4 lymphocyte count
HIV viral load
Clinical features
What is the current treatment for HIV therapy?
Combincation antiretroviral therapy - with 3 drugs from at least 2 groups
What do the different HIV drugs act on?
Different stages of HIV lifecycle
What is the adherance to medication needed to supress HIV? Can this lead to a normal life?
Adherance must be over 90%
cART can lead to a normal life but side effects can be significant
i.e metabolic, lipodystrophy
What are the three main types of medication MOAs for HIV?
Reverse transcriptase inhibtor
Integrase inhibitor
Protease inhibitor (prevents release of new virus)
When should you start HIV treatment?
If CD4 drops below 350cells/mm OR rapidly falling
What is the life expectancy based off CD4 of less than 100 before starting therapy?
52
What is the life expectancy based off CD4 of 100-200 before starting therapy?
62
What is the life expectancy based off CD4 of more than 200 before starting therapy?
70+
Why do HIV treatments fail?
Poor adherance
Not strong enough etc
All leads to viral mutation + resistance
What are the side effects of nucleoside reverse transcriptase inhibitors (HIV drug)?
Marrow toxicity
Neuropathy
Lipodystrophy
What are the side effects of non-nucleoside reverse transcriptase inhibitors drugs (HIV)?
Skin rashes
Hypersensitivity
Drug interactions
What are the side effects of protease inhbitors? (HIV drug)
Drug interactions
Diarrhoea
Lipodystrophy
HYperlipidaemia
What are the side effects of itegrase inhbiitors? (HIV drug)
Rashes
How can you reverse the effects of lipodystrophy (side effect from HIV medication?)
Change drugs Cosmetic procedures Facelift Liposuction Fillers