Genes in populations 2 Flashcards

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1
Q

what is a locus?

A

physical position of a gene or marker among a chromosome

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2
Q

what are alleles?

A

different forms of a gene

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3
Q

what is the term genotype?

A

a diploid organism with 2 alleles

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4
Q

what is a homozygote?

A

two identical alleles

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5
Q

what is a heterozygote?

A

two different alleles

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6
Q

what is polymorphism?

A

when a gene or phenotype has more than one form

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7
Q

what is the HWE?

A

using the allele frequencies in one generation to to predict genotype frequencies in the next generation

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8
Q

what are the 5 assumptions for HWE to work?

A

1) random mating
2) no natural selection
3) large population size
4) no migration
5) no mutation

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9
Q

give 4 reasons why the HWE is useful?

A

1) provides a description for how genetic variation is maintained
2) shows how blending inheritance does not happen
3) departures from HWE mean that some assumptions are not met - promotes investigations into why
4) useful in medical genetics to work out carrier frequencies

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10
Q

in the example of the peppered moths which is the melanic form and when did it have increased frequency?

A

the all black moth which increased in frequency in the industrial areas

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11
Q

which allele was dominant the melanic or the typical form?

A

the melanic allele was dominant

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12
Q

how do you calculate relative fitness when comparing 2 genotypes?

A

take the most favoured genotype as a standard fitness with level 1.0 and divide the less favoured genotype percentage recapture by the favoured

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13
Q

how do you calculate the selection coefficient and what does it measure?

A

1 minus the relative fitness of the un favoured genotype , it measures the intensity of selection

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14
Q

what is balancing selection?

A

a form of selection where heterozygotes and fitter than homozygotes

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15
Q

what is the key step in the life of HIV?

A

HIV makes enzyme reverse transcriptase which converts single stranded RNA into double stranded DNA form

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16
Q

3 reasons why HIV can develop drug resistance quickly?

A

it has a high mutation rate, a generation time of 2.5 days and a large population size

17
Q

how does the size of population affect the loss of genetic variation by drift?

A

The loss is much faster in smaller populations

18
Q

what is the problem with populations with small genetic variation?

A

high extinction risk - less capable of evolving

19
Q

how can you measure variation within in a population?

A

with genetic markers

20
Q

why is heterozygosity 35% lower on average in threatened species?

A

Because genetic factors are important

21
Q

what is the standard measure of degree of inbreeding?

A

wrights inbreeding coefficient

22
Q

what does the inbreeding coefficient show?

A

the probability that the individual is IBD for the locus in question

23
Q

what does the larger the inbreeding coefficient show?

A

the more inbred

24
Q

what does IBD stand for?

A

identical by decent

25
Q

what are 4 negative consequences of inbreeding?

A

1) higher frequency of homozygotes
2) reveal recessive harmful alleles
3) less likely to benefit from heterozygote advantage
4) inbreeding depression - lower fitness

26
Q

what can isolated human populations be used for?

A

to map disease genes