CMB1004/L03 Intracellular Compartments Flashcards

1
Q

Give the 3 major types of transport.

A

Gated transport
Transmembrane transport
Vesicular transport

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2
Q

Give 2 examples of signal sequences.

A

Nuclear localisation signal
Mitochondrial signal sequence

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3
Q

Where are signal sequences targeted?

A

N-terminal end

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4
Q

Why are proteins imported into the nucleus? (3)

A

Structure, gene transcription and regulation

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5
Q

What does nucleus-cytoplasm transport occur through?

A

Nuclear pore complex (NPC)

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6
Q

What is gene transcription regulated by in activated T-cells?

A

NF-AT

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7
Q

What sequence is required for a protein to pass through the TOM/TIM complex in mitochondria?

A

Sigla sequence

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8
Q

Where does protein synthesis start?

A

Cytosol

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9
Q

Where do proteins translocate to during synthesis?

A

Into RER membrane or lumen

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10
Q

Where are mucins found?

A

Between epithelial cells and external mucosal surfaces

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11
Q

Where is the IgA1 receptor found?

A

On Fc region of protein

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12
Q

What does plgR (polymeric immunoglobulin receptor) recognise?

A

J chain reaction of polymerised IgA and IgM

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13
Q

Name a pro-inflammatory IgG variant.

A

IgG with galactose-deficient N-glycans

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14
Q

Name an anti-inflammatory IgG variant.

A

IgG with sialylated N-glycans

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15
Q

Where can proteins travel once inside the lumen or membrane or RER? (3)

A

Remain in RER
Travel to other organelles
Export to cell surface or be secreted

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16
Q

Where can water-soluble proteins travel?

A

Remain within organelles (lumen)
Plasma membrane

17
Q

Where can membrane-associated proteins travel?

A

Remain within organelle membranes
Plasma membrane

18
Q

What is vesicular transport essential for? (2)

A

Phagocytosis
Cell-to-cell communication
Quick response to environmental changes

19
Q

What is linked by the trans-Golgi network?

A

Golgi apparatus and surrounding organelles

20
Q

What do COPII protein coats cover?

21
Q

What do COPI protein coats cover?

A

Golgi cisternae

22
Q

What do clathrin protein coats cover?

A

Vesicles secreted from the Golgi apparatus

23
Q

Which direction does the cis face of the Golgi apparatus face?

A

Inner/vesicles enter

24
Q

Which way does the trans face of the Golgi apparatus face?

A

Outer/vesicles leave

25
What modifications occur to proteins in the Golgi apparatus?
Core oligosaccharide trimmed Further sugars added/removed
26
Which region are early acting enzymes found in the Golgi apparatus?
Cis
27
Which region are late acting enzymes found in the Golgi apparatus?
Trans
28
What kind of bacteria are preferentially phagocytosed by macrophages and neutrophils?
Antibody-coated bacteria
29
What do lysosomes contain?
Acid hydrolases
30
Name the 4 distinct degradation pathways in lysosomes.
Endocytosis Macropinocytosis Phagocytosis Autophagy
31
Name 3 acid hydrolases.
Nucleases Proteases Glycosidases Lipases Phophatases Sulfatases Phospholipases
32
What is autophagy?
Degradation of unwanted proteins and organelles
33
What is dysfunctional autophagy associated with? (3)
Infectious disorders Neurodegenerative diseases Cancer
34
Name the 4 types of autophagy.
Macroautophagy Microautophagy Chaperone-mediated autophagy Selective autophagy
35
What is another name for selective autophagy?
Xenophagy
36
What is microautophagy?
Uptake of cytoplasmic components by inward invagination of lysosomal membranes
37
What is chaperone-mediated autophagy?
Direct transport of cytosolic proteins into lysosomes through translocons
38
Name 2 types of secretory pathway.
Constitutive Regulated
39
What is a chimera?
An organism or tissue that contains at least two different sets of DNA, often from zygote fusion