chapter 13 part 1 Flashcards

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1
Q

activator proteins bind regulatory sequences to ___________ transcription

A

stimulate

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2
Q

repressor proteins bind other sequences to __________ transcription

A

hinder

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3
Q

difference of cis elements in simple and complex euk

A
  • simple: single binding sites, located close to 5’ end
  • complex: multiple binding sites, located at varied distances
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4
Q

3 regulatory DNA sequences

A
  1. core promoter region
  2. proximal elements
  3. enhancer/silencer sequences
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5
Q

where is the TATA box

A

core promoter region

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6
Q

what does the core promoter region bind

A

RNA polymerase II and its associated general transcription factors

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7
Q

where are proximal elements located

A

upstream of the core promoter region

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8
Q

where do enhancer/silencer sequences act from

A

greater distances from the core promoter
- upstream, downstream, close to, very far, or within the genes they regulate

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9
Q

all 3 regulatory regions are ______-acting regulatory sequences

A

cis

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10
Q

RNA pol II and various GTFs are _______-acting regulatory proteins

A

trans

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11
Q

enhanceosomes

A

aggregations of multiple proteins that form at enhancers

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12
Q

what do enhanceosomes direct

A

DNA bending/loop formation

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13
Q

what does DNA bending/loop formation allow

A

enhance-some proteins to interact with RNA polymerase and transcription factors at the core promoter and proximal promoter elements

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14
Q

enhancer activity typically helps control what?

A

timing and location of gene transcription

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15
Q

enhancers and silencers both contain what?

A

binding sites (modules) for several transcription factors

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16
Q

what do the modules on enhancers and silencers allow

A

integration of activities of different transcription factors to produce different outputs

17
Q

pioneer factors

A

first to bind regulatory molecules, facilitating binding of additional transcription factors

18
Q

true or false: the same sequence can act as an enhancer or silencer, depending one which regulatory proteins are present

A

true

19
Q

what does the Sonic Hedgehog gene code for in humans

A

limb formation

20
Q

what is the SHH gene controlled by

A

enhancer 1 million base pairs away from the SHH gene

21
Q

how is SHH expressed

A

tissue-specific fashion due to action of 2 different enhancers

22
Q

2 different enhancers for SHH gene

A
  • brain tissue
  • developing limbs
23
Q

locus control region

A

highly specialized enhancer that regulates transcription of multiple genes packaged into complexes of closely related genes