chapter 10 part 1 Flashcards
genome content, chromosome number, and relative size/shape of each chromosome are __________________
species-specific
closely related species have _________ numbers of chromosomes
similar
do chromosomes occupy the same territory in each nucleus?
no
once confined to a territory, what happens to a chromosome
chromosome doesn’t leave until the M phase is initiated
what do chromosomes do within their territories
active and move, turn during transcription and DNA replication
how do chromosomes appear to be anchored to their territories?
by their centromeres
inter-chromosomal domains
regions between territories
what do inter-chromosomal domains act as?
channels for movement of proteins, enzymes, and RNA molecules
larger, more gene-rich chromosomes are usually found where?
center of the nucleus
smaller, less gene-rich chromosomes are usually found where?
near periphery of nucleus
what do karyotypes allow for
recognition of abnormalities in chromosome number or structure
- also comparison between species
what elements can be easily identified in a karyotype
- extra/missing chromosomes
- rearrangements (insertions, deletions)
in situ hybridization
uses molecular probes (DNA/RNA sequences) labeled with fluorescent to detect their target sequences
first-generation methods used nucleotide probes labeled with
P32
fluorescent in situ hybridization (FISH)
use multiple fluorescently colored labeled so each labeled chromosome can be identified with different wavelengths
short arm of chromosome
p
long arm of chromosome
q
metacentric
centromere is near the middle of the chromosome
submetacentric
centromere is between the center and the tip
acrocentric
centromere is close to one end
telocentric
centromere is at tip of chromosome and there is no p arm
acentric
piece of DNA without a centromere
heterochromatin
- more condensed
- silenced genes (methylated)
- stains darker
- more repetitive DNA
euchromatin
- less condensed
- actively expression genes (acetylated)
- stains lighter
- less repetitive DNA
chromosome banding allows cytogeneticists
cytogeneticists can identify each chromosome in a karyotype
standard for human chromosome banding
G (Giemsa) banding - patterns distinct and reproducible
how many genes in human genome
22,000
2000 Giemsa bands
- average of 11 genes/band (both light and dark)
- assume all bands have equal number of genes
light Giemsa bands =
euchromatin
dark Giemsa bands =
heterochromatin
how are designations stated
1q3.2.3
- numbering begins at the centromere and progresses outward in each direction
chromosome nondisjunction
failure of homologous chromosomes or sister chromatids to separate as they normally do during cell division
what can chromosome nondisjunction result in
- abnormalities in chromosome number (aneuploidy)
- somatic cells: one daughter w extra chromosome (2n+1) and other missing (2n-1)
mitotic nondisjunction
- if at 1st division (zygotic) all cells aneuploid
- if later in development, aneuploid sectors in an organism
meiotic nondisjunction
- aneuploid haploid organisms (n+/-1)
- aneuploid gametes (n+/-1) leading to aneuploid zygotes
- increased frequency if crossing-over fails
result of nondisjunction in germ-line cells
aneuploid gametes that can produce aneuploid zygotes
nondisjunction in meiosis I results from
failure of homologs to separate
gametes produced from nondisjunction in meiosis I
n+1 or n-1
fusion of n+/-1 gametes with normal n gametes produces…
trisomic (2n+1) or monosomic (2n-1) offspring
nondisjunction in meiosis II results from
failure of sister chromatids to separate normally
gametes produced from nondisjunction in meiosis II
- 2 normal gametes
- one (n+1)
- one (n-1)
what do changes in gene dosage lead to
imbalance of gene products from the affected chromosome relative to the unaffected chromosome
aneuploidy laters the dosage of what?
all the genes on the affected chromosome
how much more product is produced in trisomies
50% more
how much less product is produced in monosomies
50% less
do animals or plants tolerate gene dosage changes more readily?
plants
do aneuploids usually survive?
no
what trisomies are usually seen in newborn infants
13, 18, and 21
can sex chromosomes have viable monosomies or trisomies in humans
both
Pallister-Killian Syndrome
occurs due to presence of anomalous extra isochromosome 12p (short arm)
isochromosome
unbalanced structural abnormality in which the arms of the chromosome are mirror images of each other
what does Palliester-Killian syndrome lead to
development of Tetrasomy 12p
symptoms of Pallister-Killian syndrome
- hypotonia
- intellectual disability
- distinctive facial features
- sparse hair
- unusual skin coloring
- birth coloring
how is Pallister-Killian a mosaic condition
because not all cells have the extra isochromosome
what do studies that monitor human pregnancies indicate
half of all conceptions spontaneously abort during the first trimester
more than half of the spontaneously aborted pregnancies carry what?
abnormalities of chromosome number or structure
research has identified a link between trisomy 21 and what?
advanced maternal age (anyone over 35)
what are responsible for cognitive disabilities and heart abnormalities in trisomy 21?
small number of genes on chromosome 21
DSCR (Down Syndrome Critical Region)
correlated with majority of DS symptoms
DYRK
candidate gene known to produce dosage-sensitive learning defects in mice and flies, makes major contribution to down syndrome
DSCAM gene in mice and fruit flies
has homolog associated with formation of the heart and nervous system
Turner syndrome
monosomy of X chromosome with no second sex chromosome
what does Turner syndrome produce
phenotypically sterile females
SHOX gene in XO embryos
single copy of gene, which is not activated by dosage compensation, is insufficient to direct normal development (haploinsufficient)
what does mosaicism result from
mitotic nondisjunction early in embryogenesis
ex. of Turner syndrome and mosaicism
25-30% of cases occur in females mosaic w:
- 46 XX cells
- 45 XO cells
- 47 XXX cells
uniparental disomy
both copies of homologous chromosome pair arise from same parent
what was uniparental disomy first identified in connection with
- Angelman syndrome
- Prader-Willi syndrome
- caused by deletion of a small region of chromosome 15
possible mechanisms of uniparental disomy
- same chromosome (15) undergoes nondisjunction in both sperm and egg - when they unit, produce ind. w/ 2 copies of chromosome 15 from only 1 parent
- more often: nondisjunction occurs in one parent to produce gamete w/ 2 copies of chromosome - units with normal gamete to produce trisomic zygote - trisomy rescue
trisomy rescue
one copy of trisomy chromosome is randomly ejected in one of the first mitotic divisions after fertilization
- if 2 copies retained by zygote are from same parent, uniparental disomy results
polyploidy
presence of 3+ whole sets of chromosomes in the nucleus of an organism
autopolyploidy
duplication of chromosome sets within species
polyploidy in plants typically increases
fruit and flower size
allolpolyploidy
combining chromosome sets of different species
what do allolpolyploids result in
interspecific hybrid offspring that is infertile because the chromosome sets are not homologous
allopolyploidy involves sets of ________ homologous chromosomes
partially - homologous
how can a hybrid be fertile in allolpolyploidy
chromosome nondisjunction leads to cells with double the number of chromosomes, so now each chromosome has homolog for pairing
how do allopolyploids occur
naturally or via human manipulation
fertility is decreased in _____-numbered polyploids
odd (3n, 5n)
hybrid vigor
more rapid growth, increased fruit/flower production, improved resistance to disease of polyploids
Triticum aestivum
- bread wheat (2n = 42) = natural allolpolyploid
- appears to be hexaploid (6x=42) = six sets of similar chromosomes from at least 3 separate varieties
what are commercial bananas and seedless watermelons
triploids
plant monoploids can be induced to grow from what?
1n cells in anthers
G. Karpechencko
wanted plant with cabbage leaves and radish roots to solve world hunger
cabbage leaves/radish root plants
- each species has 18 chromosomes
- induced fusion of gametes generated sterile hybrids
- eventually produces seeds, had 36 chromosomes
why did the cabbage/radish plant have 36 chromosomes
derived from spontaneous doubling of chromosome number which allows proper pairing at meiosis
amphidiploid
interspecific hybrid having a complete diploid chromosome set from each parent form
what is amphidiploid also called
allotetraploid (doubled diploid)